RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ZBTB18Q99592 522 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 PRPF18Q99633 342 aaKnown RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 GPA33Q99795 319 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 NELFAQ9H3P2 528 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 BEX1Q9HBH7 125 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 SLC6A13Q9NSD5 602 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 TMEM45AQ9NWC5 275 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 PLEK2Q9NYT0 353 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 SLAMF8Q9P0V8 285 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 MYEF2Q9P2K5 600 aaKnown RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 BTNL2Q9UIR0 455 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 FLVCR1Q9Y5Y0 555 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 A0A1B0GUS0 222 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 PRSS51A0A1B0GVH4 220 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 MDFIC2A0A1B0GVS7 189 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 CCDC154A6NI56 674 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 RNASET2O00584 256 aaKnown RBP7.77□□□□□ -1.17
NUP54-211ENST00000512151 GPR171O14626 319 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 SYNGR3O43761 229 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 CPSF4O95639 269 aaKnown RBP7.77□□□□□ -1.17
NUP54-211ENST00000512151 ATP6V1G2O95670 118 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 LGI1O95970 557 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 GSNP06396 782 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 COX4I1P13073 169 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 HPGDP15428 266 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 SUMO3P55854 103 aaPredicted RBP7.77□□□□□ -1.17
NUP54-211ENST00000512151 HBA1P69905 142 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 LCN2P80188 198 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 HSPB3Q12988 150 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 SNCBQ16143 134 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 DPY19L1Q2PZI1 675 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 GTDC1Q4AE62 458 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 KLHL26Q53HC5 615 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 C3orf33Q6P1S2 294 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 LINGO2Q7L985 606 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 LRP11Q86VZ4 500 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 WDFY1Q8IWB7 410 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 MSRB3Q8IXL7 192 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 OR1K1Q8NGR3 316 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 PSMA8Q8TAA3 256 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 PIGXQ8TBF5 258 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 OR5P2Q8WZ92 322 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 C16orf58Q96GQ5 468 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 ARL5BQ96KC2 179 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 CCDC115Q96NT0 180 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 PAIP1Q9H074 479 aaKnown RBP7.77□□□□□ -1.17
NUP54-211ENST00000512151 OBP2BQ9NPH6 170 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 ATAD3AQ9NVI7 634 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 GIN1Q9NXP7 522 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 C1RLQ9NZP8 487 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 SACSQ9NZJ4 4579 aa7.77□□□□□ -1.17
NUP54-211ENST00000512151 TENM2Q9NT68 2774 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 A0A096LPE4 126 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 ARPC4-TTLL3A0A0A6YYG9 625 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 CLPSL1A2RUU4 121 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 ZNF503-AS2A6NEH8 195 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 TTC36A6NLP5 189 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 M0R233 179 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 SLC22A2O15244 555 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 CFLARO15519 480 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 CDC14BO60729 498 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 SLITRK5O94991 958 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 KRT16P08779 473 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 GATA3P23771 443 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 NTSP30990 170 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 CSNK2A1P68400 391 aaPredicted RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 MRPS11P82912 194 aaKnown RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 SNTB2Q13425 540 aaKnown RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 C3orf36Q3SXR2 165 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 SYT14P1Q58G82 188 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 ARMCX4Q5H9R4 360 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 EXOSC6Q5RKV6 272 aaKnown RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 ANXA8L1Q5VT79 327 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 REP15Q6BDI9 236 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 KRT80Q6KB66 452 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 DLEU7Q6UYE1 221 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 NATD1Q8N6N6 113 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 ZIC4Q8N9L1 334 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 OR4A15Q8NGL6 344 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 OR4F5Q8NH21 305 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 OR5AK3PQ8NH89 298 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 RP9Q8TA86 221 aaKnown RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 TSPEARQ8WU66 669 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 UTP4Q969X6 686 aaKnown RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 KTI12Q96EK9 354 aaPredicted RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 NSL1Q96IY1 281 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 SYT3Q9BQG1 590 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 ZNF416Q9BWM5 594 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 MMP26Q9NRE1 261 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 SLC25A37Q9NYZ2 338 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 TESQ9UGI8 421 aaKnown RBP7.76□□□□□ -1.17
NUP54-211ENST00000512151 NDUFAF1Q9Y375 327 aa7.76□□□□□ -1.17
NUP54-211ENST00000512151 IGHV3OR16-10A0A075B7F0 116 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 TRBV5-3A0A0A0MS03 114 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 NDUFA7O95182 113 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 NGFP01138 241 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 IGKV3-15P01624 115 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 TFPIP10646 304 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms