RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	PPP1R27	Q86WC6	154 aa		3.77	□□□□□ -1.81
LINC01088-208	ENST00000511895	EID2	Q8N6I1	236 aa		3.77	□□□□□ -1.81
LINC01088-208	ENST00000511895	ALLC	Q8N6M5	410 aa		3.77	□□□□□ -1.81
LINC01088-208	ENST00000511895	RNF138	Q8WVD3	245 aa		3.77	□□□□□ -1.81
LINC01088-208	ENST00000511895	C14orf79	Q96F83	325 aa		3.77	□□□□□ -1.81
LINC01088-208	ENST00000511895	FEM1A	Q9BSK4	669 aa		3.77	□□□□□ -1.81
LINC01088-208	ENST00000511895	ONECUT1	Q9UBC0	465 aa		3.77	□□□□□ -1.81
LINC01088-208	ENST00000511895	TENM3	Q9P273	2699 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895		A0A1B0GTQ1	180 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	TUBAL3	A6NHL2	446 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	TNFSF15	O95150	251 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	GABRG2	P18507	467 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	CYLC1	P35663	651 aa	Predicted RBP	3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	STAR	P49675	285 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	RGS1	Q08116	209 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	AANAT	Q16613	207 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	FAM120AOS	Q5T036	256 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	PVRIG	Q6DKI7	326 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	IGFL2	Q6UWQ7	119 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	DNM1P46	Q6ZS02	220 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	RBM43	Q6ZSC3	357 aa	Known RBP	3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	LANCL3	Q6ZV70	420 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	BCORP1	Q8N888	145 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	ZNF285	Q96NJ3	590 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	CATSPER2	Q96P56	530 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	GLIPR2	Q9H4G4	154 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	RDH8	Q9NYR8	311 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	ADAM28	Q9UKQ2	775 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	FOXJ3	Q9UPW0	622 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	TP53TG5	Q9Y2B4	290 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	AP4B1	Q9Y6B7	739 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	PLIN4	Q96Q06	1357 aa		3.76	□□□□□ -1.81
LINC01088-208	ENST00000511895	SF3B1	O75533	1304 aa	Known RBP eCLIP	3.75	□□□□□ -1.81	4e-7	■■■■□ 23.4
LINC01088-208	ENST00000511895	PINLYP	A6NC86	204 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	ABCD4	O14678	606 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	KLF8	O95600	359 aa	Predicted RBP	3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	NR2C1	P13056	603 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	CCND2	P30279	289 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	RABIF	P47224	123 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	ST3GAL3	Q11203	375 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	ART3	Q13508	389 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	ADPRM	Q3LIE5	342 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	CCDC14	Q49A88	953 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	TMEM52B	Q4KMG9	183 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	TWF2	Q6IBS0	349 aa	Known RBP	3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	TIFAB	Q6ZNK6	161 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	ARL10	Q8N8L6	244 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	CNIH3	Q8TBE1	160 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	HPDL	Q96IR7	371 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	FAM111A	Q96PZ2	611 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	PLA2G12A	Q9BZM1	189 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	OR51J1	Q9H342	316 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	NANOG	Q9H9S0	305 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	MCCC2	Q9HCC0	563 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	VAT1L	Q9HCJ6	419 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	CD274	Q9NZQ7	290 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	XPO7	Q9UIA9	1087 aa	Known RBP	3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	SMC3	Q9UQE7	1217 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	MAB21L2	Q9Y586	359 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	UBR4	Q5T4S7	5183 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	COL27A1	Q8IZC6	1860 aa	Predicted RBP	3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	CHD3	Q12873	2000 aa	Known RBP	3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	ZAN	Q9Y493	2812 aa		3.75	□□□□□ -1.81
LINC01088-208	ENST00000511895	ZBED9	Q6R2W3	1325 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	IGHV7-81	A0A0B4J1V7	117 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	GSTTP1	A0A1W2PQM5	241 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	PANO1	I0J062	215 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	FCN1	O00602	326 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	PRRG1	O14668	218 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	PRKAB2	O43741	272 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	OBSL1	O75147	1896 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	SEC22B	O75396	215 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	HPN	P05981	417 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	THRB	P10828	461 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	HSPA5	P11021	654 aa	Known RBP	3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	VDR	P11473	427 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	IGLL1	P15814	213 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	SERPINA2	P20848	420 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	PAICS	P22234	425 aa	Known RBP	3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	AXL	P30530	894 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	ASMT	P46597	345 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	NAPA	P54920	295 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	PDGFRL	Q15198	375 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	MISP	Q8IVT2	679 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	OR9A1P	Q8NGU1	263 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	DCUN1D4	Q92564	292 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	HES7	Q9BYE0	225 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	NINJ2	Q9NZG7	142 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	CYTH4	Q9UIA0	394 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	UBQLN1	Q9UMX0	589 aa	Known RBP	3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	MGAT4B	Q9UQ53	548 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	WDR45	Q9Y484	360 aa		3.74	□□□□□ -1.81
LINC01088-208	ENST00000511895	KRT87P	A6NCN2	255 aa		3.73	□□□□□ -1.81
LINC01088-208	ENST00000511895	OR6C65	A6NJZ3	312 aa		3.73	□□□□□ -1.81
LINC01088-208	ENST00000511895	RTL8C	O15255	209 aa		3.73	□□□□□ -1.81
LINC01088-208	ENST00000511895	YKT6	O15498	198 aa		3.73	□□□□□ -1.81
LINC01088-208	ENST00000511895	HBQ1	P09105	142 aa		3.73	□□□□□ -1.81
LINC01088-208	ENST00000511895	MAGEA5	P43359	124 aa		3.73	□□□□□ -1.81
LINC01088-208	ENST00000511895	QARS	P47897	775 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms