RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ERVV-1B6SEH8 477 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 TRIM49D1C9J1S8 452 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ERLIN1O75477 346 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 BBOX1O75936 387 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 IGLV1-47P01700 117 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 IGHV2-5P01817 119 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 CRYGBP07316 175 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ZNF17P17021 662 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 TBPP20226 339 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 CCNE1P24864 410 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 FDFT1P37268 417 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 VHLP40337 213 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 CRYBB2P43320 205 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 NPBWR2P48146 333 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ARRB1P49407 418 aaPredicted RBP2.11□□□□□ -2.07
CHD1-207ENST00000511628 PRMT2P55345 433 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ORC2Q13416 577 aaPredicted RBP2.11□□□□□ -2.07
CHD1-207ENST00000511628 UNC119Q13432 240 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ARFRP1Q13795 201 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 KIAA0087Q14695 138 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 GNMTQ14749 295 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 NRF1Q16656 503 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ZNF530Q6P9A1 599 aaPredicted RBP2.11□□□□□ -2.07
CHD1-207ENST00000511628 TRIM40Q6P9F5 258 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 RNF165Q6ZSG1 346 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 Q6ZSR3 168 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 UTS2BQ765I0 119 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 PUSL1Q8N0Z8 303 aaKnown RBP2.11□□□□□ -2.07
CHD1-207ENST00000511628 SLC2A14Q8TDB8 520 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ACOT11Q8WXI4 607 aaPredicted RBP2.11□□□□□ -2.07
CHD1-207ENST00000511628 RASL11BQ9BPW5 248 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 CCDC77Q9BR77 488 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 PELOQ9BRX2 385 aaKnown RBP2.11□□□□□ -2.07
CHD1-207ENST00000511628 NUP58Q9BVL2 599 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 DEFB127Q9H1M4 99 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 NEUROG2Q9H2A3 272 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 SRMSQ9H3Y6 488 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 SLC25A22Q9H936 323 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 ANKRA2Q9H9E1 313 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 CALYQ9NYX4 217 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 KCNIP1Q9NZI2 227 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 SPATA7Q9P0W8 599 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 NEU3Q9UQ49 428 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 CDHR2Q9BYE9 1310 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 GTF3C1Q12789 2109 aa2.11□□□□□ -2.07
CHD1-207ENST00000511628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.1□□□□□ -2.07
CHD1-207ENST00000511628 IGKV1D-13A0A0B4J2D9 117 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 CCDC169A6NNP5 214 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 GOSR2O14653 212 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 PSTPIP1O43586 416 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 NDUFB10O96000 172 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 HOXC4P09017 264 aaPredicted RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 PABPC4LP0CB38 370 aaKnown RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 IGKV1-13P0DP09 117 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 ICAM2P13598 275 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 ABOP16442 354 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 ZNF43P17038 809 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 RCC1P18754 421 aaPredicted RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 ATP5C1P36542 298 aaKnown RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 GLP1RP43220 463 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 TIMM10P62072 90 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 KCNJ2P63252 427 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 SRSF5Q13243 272 aaKnown RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 CUL2Q13617 745 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 CYTH1Q15438 398 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 HSP90AB3PQ58FF7 597 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 KHDRBS2Q5VWX1 349 aaKnown RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 SASS6Q6UVJ0 657 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 ZNF836Q6ZNA1 936 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 NANOGNBQ7Z5D8 188 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 ZADH2Q8N4Q0 377 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 ZNF557Q8N988 423 aaPredicted RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 FNDC5Q8NAU1 212 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 PLPPR1Q8TBJ4 325 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 SLC22A8Q8TCC7 542 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 NDRG1Q92597 394 aaKnown RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 UCN3Q969E3 161 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 RASD2Q96D21 266 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 SORT1Q99523 831 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 RIOK2Q9BVS4 552 aaKnown RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 TMEM59Q9BXS4 323 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 PKIBQ9C010 78 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 OR11A1Q9GZK7 315 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 GBA3Q9H227 469 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 SIAEQ9HAT2 523 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 UGT1A7Q9HAW7 530 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 UGT1A10Q9HAW8 530 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 UGT1A8Q9HAW9 530 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 EML4Q9HC35 981 aaKnown RBP2.1□□□□□ -2.07
CHD1-207ENST00000511628 MMP26Q9NRE1 261 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 SLC2A8Q9NY64 477 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 IKZF2Q9UKS7 526 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 TP53TG5Q9Y2B4 290 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 SCN2AQ99250 2005 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 NSD2O96028 1365 aa2.1□□□□□ -2.07
CHD1-207ENST00000511628 HEATR9A2RTY3 570 aa2.09□□□□□ -2.07
CHD1-207ENST00000511628 CTAGE15A4D2H0 777 aa2.09□□□□□ -2.07
CHD1-207ENST00000511628 GJE1A6NN92 205 aa2.09□□□□□ -2.07
CHD1-207ENST00000511628 CCL21O00585 134 aa2.09□□□□□ -2.07
CHD1-207ENST00000511628 RNF13O43567 381 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms