RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RPL18Q07020 188 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 APOOLQ6UXV4 268 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 CDC20BQ86Y33 519 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 TIGD4Q8IY51 512 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 ZNF687Q8N1G0 1237 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 FCAMRQ8WWV6 532 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 RLN3Q8WXF3 142 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 RAB40AQ8WXH6 277 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 RNF166Q96A37 237 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 SLC25A38Q96DW6 304 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 KTI12Q96EK9 354 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 MNTQ99583 582 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 C20orf85Q9H1P6 137 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 ZFP64Q9NPA5 681 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 IKZF2Q9UKS7 526 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 MMACHCQ9Y4U1 282 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 SPTBN5Q9NRC6 3674 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 FRG2CA6NGY1 282 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 ZNF593O00488 134 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 CXCL3P19876 107 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 SLC6A8P48029 635 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 CCR9P51686 369 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 CLDN12P56749 244 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 LTBQ06643 244 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 ST3GAL2Q16842 350 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 STAC2Q6ZMT1 411 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 NUP54Q7Z3B4 507 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 C7orf57Q8NEG2 295 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 SYNPRQ8TBG9 265 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 MAP6Q96JE9 813 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 ADOQ96SZ5 270 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 LAT2Q9GZY6 243 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 C12orf10Q9HB07 376 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 SLC2A4RGQ9NR83 387 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 LANCL2Q9NS86 450 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 MRPL15Q9P015 296 aaKnown RBP16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 EMC3Q9P0I2 261 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 SLC23A1Q9UHI7 598 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 KLHDC2Q9Y2U9 406 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 PEX14O75381 377 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 NME1P15531 152 aaKnown RBP16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 POU3F3P20264 500 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 MST1P26927 711 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 MAOBP27338 520 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 MRPS10P82664 201 aaKnown RBP16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 MESTQ5EB52 335 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 TMEM69Q5SWH9 247 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 GPR139Q6DWJ6 353 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 SERPINA12Q8IW75 414 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 FAM160A2Q8N612 972 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 OR6N2Q8NGY6 317 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 OR52I2Q8NH67 350 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 C1orf216Q8TAB5 229 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 KLHL15Q96M94 604 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 TSPAN32Q96QS1 320 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 HRASLSQ9HDD0 168 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 NKIRAS2Q9NYR9 191 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 FRRS1LQ9P0K9 344 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 CACNA1IQ9P0X4 2223 aa16.3■□□□□ 0.2
CCHCR1-228ENST00000509552 TVP23AA6NH52 213 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 H7C1C5 153 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 GPR171O14626 319 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 KHDRBS3O75525 346 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 ZNF432O94892 652 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 ART1P52961 327 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 LCN6P62502 163 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 SFRP4Q6FHJ7 346 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 TTLL10Q6ZVT0 673 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 BEST4Q8NFU0 473 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 OR8H1Q8NGG4 311 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 C15orf40Q8WUR7 153 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 MSANTD3Q96H12 275 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 GAL3ST4Q96RP7 486 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 COMMD4Q9H0A8 199 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 WDR76Q9H967 626 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 FKRPQ9H9S5 495 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 CUTCQ9NTM9 273 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 OR5V1Q9UGF6 321 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 FKBP7Q9Y680 259 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 TMEM14AQ9Y6G1 99 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 CEP290O15078 2479 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 MEIKINA0A087WXM9 373 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 DCTN6O00399 190 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 PRAF2O60831 178 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 SULT1A3P0DMM9 295 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 SULT1A4P0DMN0 295 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 CXCR1P25024 350 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 SOX2P48431 317 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 PWWP2BQ6NUJ5 590 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 LRRN1Q6UXK5 716 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 OR6V1Q8N148 313 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 BMPERQ8N8U9 685 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 TAAR8Q969N4 342 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 ZDHHC12Q96GR4 267 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 GPR137Q96N19 417 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 CHRNA10Q9GZZ6 450 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 ADAM19Q9H013 955 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 FOXJ3Q9UPW0 622 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 ETV7Q9Y603 341 aa16.29■□□□□ 0.2
CCHCR1-228ENST00000509552 RNF215Q9Y6U7 377 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms