RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 EDNRAP25101 427 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 APEX1P27695 318 aaKnown RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 ADH6P28332 368 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 GTF2E2P29084 291 aaKnown RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 RBMS1P29558 406 aaKnown RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 NAA10P41227 235 aaPredicted RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 EIF1P41567 113 aaKnown RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 CD97P48960 835 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 DAP3P51398 398 aaKnown RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 PSMD7P51665 324 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 NUBP1P53384 320 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 FBXW4P57775 412 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 E2F1Q01094 437 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 RASGEF1BQ0VAM2 473 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 DNASE1L3Q13609 305 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 TOMM34Q15785 309 aaPredicted RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 ZNF79Q15937 498 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 TP53I3Q53FA7 332 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 MESTQ5EB52 335 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 FDX2Q6P4F2 183 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 OPN5Q6U736 354 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 ZNF517Q6ZMY9 492 aaPredicted RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 PRR23CQ6ZRP0 262 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 SHISA6Q6ZSJ9 500 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 H1FNTQ75WM6 255 aaPredicted RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 ZBTB44Q8NCP5 570 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 FAM83FQ8NEG4 500 aaPredicted RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 SLC25A43Q8WUT9 341 aaPredicted RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 NXPE2Q96DL1 559 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 SPACA9Q96E40 222 aaPredicted RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 SLC22A4Q9H015 551 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 RNF32Q9H0A6 362 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 PPP1R3EQ9H7J1 279 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 OCIAD1Q9NX40 245 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 KLRF1Q9NZS2 232 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 PPP4R1LQ9P1A2 415 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 PISDQ9UG56 409 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 TEKT2Q9UIF3 430 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 LAMP5Q9UJQ1 280 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 ZNF346Q9UL40 294 aaKnown RBP8.36□□□□□ -1.07
HTT-205ENST00000509043 B3GALT5Q9Y2C3 310 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 ZNF281Q9Y2X9 895 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 WIF1Q9Y5W5 379 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 B3GALT1Q9Y5Z6 326 aa8.36□□□□□ -1.07
HTT-205ENST00000509043 SPTBP11277 2137 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 IGHV3-20A0A0C4DH32 117 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 A0A1W2PNV4 684 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 TMEM221A6NGB7 291 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 TMEM212A6NML5 194 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 FTCDNL1E5RQL4 147 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 M0R296 226 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 KHNYNO15037 678 aaKnown RBP8.35□□□□□ -1.07
HTT-205ENST00000509043 LRRTM2O43300 516 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ARHGEF9O43307 516 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 SELENOFO60613 162 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ITGA10O75578 1167 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 TPPPO94811 219 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 RAF1P04049 648 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 NPR2P20594 1047 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 GRPRP30550 384 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ACVR1BP36896 505 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 NR4A2P43354 598 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 RANBP1P43487 201 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 PUDPQ08623 228 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 PCOLCEQ15113 449 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ACKR1Q16570 336 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 PYDC2Q56P42 97 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 TRIQKQ629K1 86 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 MZT2BQ6NZ67 158 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 SFXN4Q6P4A7 337 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 CNIH2Q6PI25 160 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 KCTD18Q6PI47 426 aaPredicted RBP8.35□□□□□ -1.07
HTT-205ENST00000509043 LYPD8Q6UX82 237 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 SSX6Q7RTT6 188 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 SNX29P2Q8IUI4 249 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 OR6V1Q8N148 313 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ARMC10Q8N2F6 343 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 OR2Y1Q8NGV0 311 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ZBTB8AQ96BR9 441 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 TXNDC15Q96J42 360 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ADAD1Q96M93 576 aaKnown RBP8.35□□□□□ -1.07
HTT-205ENST00000509043 DCLRE1CQ96SD1 692 aaKnown RBP8.35□□□□□ -1.07
HTT-205ENST00000509043 CMKLR1Q99788 373 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 STRADBQ9C0K7 418 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 SLITRK2Q9H156 845 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 PTGES2Q9H7Z7 377 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 METTL7AQ9H8H3 244 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 CYSLTR2Q9NS75 346 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ALKBH4Q9NXW9 302 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 COMMD3Q9UBI1 195 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 COPS3Q9UNS2 423 aa8.35□□□□□ -1.07
HTT-205ENST00000509043 ARID1BQ8NFD5 2236 aaPredicted RBP8.35□□□□□ -1.07
HTT-205ENST00000509043 IGHV1-45A0A0A0MS14 117 aa8.34□□□□□ -1.07
HTT-205ENST00000509043 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
HTT-205ENST00000509043 DKK1O94907 266 aa8.34□□□□□ -1.07
HTT-205ENST00000509043 ABHD16AO95870 558 aa8.34□□□□□ -1.07
HTT-205ENST00000509043 SLC2A2P11168 524 aaPredicted RBP8.34□□□□□ -1.07
HTT-205ENST00000509043 NR2C1P13056 603 aa8.34□□□□□ -1.07
HTT-205ENST00000509043 ICAM2P13598 275 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms