RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ARHGDIAP52565 204 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 CLDN17P56750 224 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 RAP1BP61224 184 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 RAP1AP62834 184 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 PRKCDQ05655 676 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 RIPK1Q13546 671 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 ADAM5Q6NVV9 412 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 ANKRD16Q6P6B7 361 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 UNQ6126/PRO20091Q6UXV3 157 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 TMPRSS11FQ6ZWK6 438 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 AQP12AQ8IXF9 295 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 FAM156AQ8NDB6 213 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 OR6N1Q8NGY5 312 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF566Q969W8 418 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 SLC25A44Q96H78 314 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-220ENST00000505005 RBP7Q96R05 134 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 KCNS3Q9BQ31 491 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 PRSS27Q9BQR3 290 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 CADM1Q9BY67 442 aaKnown RBP8.7□□□□□ -1.02
NR1I3-220ENST00000505005 AMBRA1Q9C0C7 1298 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 NMNAT1Q9HAN9 279 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-220ENST00000505005 SMURF2Q9HAU4 748 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 A4GNTQ9UNA3 340 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 POFUT2Q9Y2G5 429 aa8.7□□□□□ -1.02
NR1I3-220ENST00000505005 SH3PXD2BA1X283 911 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 EFCAB9A8MZ26 197 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 MS4A18H0YCH9 400 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 BLOC1S5-TXNDC5H3BN57 136 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 ARPC2O15144 300 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 GADD45GO95257 159 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 IFI30P13284 250 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 NPR2P20594 1047 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 IGHV1-2P23083 117 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 DNAJA1P31689 397 aaKnown RBP8.69□□□□□ -1.02
NR1I3-220ENST00000505005 CSNK1A1P48729 337 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 CRYBA2P53672 197 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 POU3F1Q03052 451 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-220ENST00000505005 GABRA6Q16445 453 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 MS4A18Q3C1V0 323 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 TSPO2Q5TGU0 170 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 GPR139Q6DWJ6 353 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 LCN8Q6JVE9 175 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 PGM2L1Q6PCE3 622 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 PLXDC2Q6UX71 529 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 RINLQ6ZS11 566 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 SLC35D2Q76EJ3 337 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 OAFQ86UD1 273 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 RBM45Q8IUH3 476 aaKnown RBP8.69□□□□□ -1.02
NR1I3-220ENST00000505005 EPHX4Q8IUS5 362 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 C1orf174Q8IYL3 243 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 ZIC4Q8N9L1 334 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 S100PBPQ96BU1 408 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 C1orf198Q9H425 327 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 INIPQ9NRY2 104 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 SLC7A10Q9NS82 523 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 HIF3AQ9Y2N7 669 aa8.69□□□□□ -1.02
NR1I3-220ENST00000505005 ARPC4-TTLL3A0A0A6YYG9 625 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 SLC35F4A4IF30 521 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF99A8MXY4 864 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-220ENST00000505005 PDLIM1O00151 329 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 XKRYO14609 159 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ARHGEF9O43307 516 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 LYZL6O75951 148 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF432O94892 652 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 RAF1P04049 648 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 HRGP04196 525 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 TSPAN19P0C672 248 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 RAP2AP10114 183 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 NCK1P16333 377 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ARR3P36575 388 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 HMGA2P52926 109 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 CLRN1P58418 232 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 KEAP1Q14145 624 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 TAB1Q15750 504 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ALG10Q5BKT4 473 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 THEM4Q5T1C6 240 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF627Q7L945 461 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 VTCN1Q7Z7D3 282 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 CDH24Q86UP0 819 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 CDC20BQ86Y33 519 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ZDHHC21Q8IVQ6 265 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 NKAIN4Q8IVV8 208 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 C20orf196Q8IYI0 205 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 RNF148Q8N7C7 305 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 OR4D11Q8NGI4 311 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF775Q96BV0 537 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-220ENST00000505005 MBD6Q96DN6 1003 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF385AQ96PM9 386 aaKnown RBP8.68□□□□□ -1.02
NR1I3-220ENST00000505005 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ALG12Q9BV10 488 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 ULBP2Q9BZM5 246 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 GRIP2Q9C0E4 1043 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 TXNIPQ9H3M7 391 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 SLC17A5Q9NRA2 495 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 NDUFAF4Q9P032 175 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 PRSS50Q9UI38 385 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 USP22Q9UPT9 525 aa8.68□□□□□ -1.02
NR1I3-220ENST00000505005 RNF115Q9Y4L5 304 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms