RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TMEM255AQ5JRV8 349 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 PRAMEF17Q5VTA0 474 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SLC6A19Q695T7 634 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 THOC7Q6I9Y2 204 aaKnown RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 TTLL10Q6ZVT0 673 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 FAM220AQ7Z4H9 259 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 GKN2Q86XP6 184 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 CDC20BQ86Y33 519 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 OR6V1Q8N148 313 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 BEST4Q8NFU0 473 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF563Q8TA94 476 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 GIMAP1Q8WWP7 306 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 TAAR8Q969N4 342 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ADAD1Q96M93 576 aaKnown RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SLC46A1Q96NT5 459 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 OR2M2Q96R28 347 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 GAL3ST4Q96RP7 486 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ELF4Q99607 663 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 NRSN2Q9GZP1 204 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 FKRPQ9H9S5 495 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 EMC7Q9NPA0 242 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 COPZ2Q9P299 210 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 RCE1Q9Y256 329 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SLC6A5Q9Y345 797 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 A0A1W2PR77 199 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 CDC14CA4D256 554 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 FRG2CA6NGY1 282 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 H3BMH7 237 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 GMDSO60547 372 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 AKR7A3O95154 331 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 DDAH2O95865 285 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 TXNDC12O95881 172 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 IGKV3-11P04433 115 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 H2AFB2P0C5Z0 115 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ADRA2CP18825 462 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 NUDT1P36639 197 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SOX2P48431 317 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 RPS15P62841 145 aaKnown RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 DYRK1AQ13627 763 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ALKBH1Q13686 389 aaKnown RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 TOMM34Q15785 309 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 C1QTNF12Q5T7M4 302 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 CD276Q5ZPR3 534 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SLC22A10Q63ZE4 541 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 STAC2Q6ZMT1 411 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 CREB3L2Q70SY1 520 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 BTN2A1Q7KYR7 527 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SYT13Q7L8C5 426 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 NANOGNBQ7Z5D8 188 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 TMEM151BQ8IW70 566 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 TSTD1Q8NFU3 115 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 OR52I2Q8NH67 350 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF721Q8TF20 911 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ADIPOR1Q96A54 375 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 LCORQ96JN0 433 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 C7orf50Q9BRJ6 194 aaKnown RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 C20orf85Q9H1P6 137 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 WDR76Q9H967 626 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 BEX1Q9HBH7 125 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 CUTCQ9NTM9 273 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 DHCR7Q9UBM7 475 aaKnown RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 GRHPRQ9UBQ7 328 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 OR5V1Q9UGF6 321 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SLC23A1Q9UHI7 598 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 MOKQ9UQ07 419 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 V9GY05 133 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 CPAMD8Q8IZJ3 1885 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SPAG17Q6Q759 2223 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 IGKV3D-11A0A0A0MRZ8 115 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 TMEM150CB9EJG8 249 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 SDC3O75056 442 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 ITGA10O75578 1167 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 PTHLHP12272 177 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 ANXA3P12429 323 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 GLULP15104 373 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 CD38P28907 300 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 RORAP35398 523 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 Q499Y3 187 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 PWWP2BQ6NUJ5 590 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 POMZP3Q6PJE2 187 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 DNAAF1Q8NEP3 725 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 OR11H4Q8NGC9 324 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 OR6N2Q8NGY6 317 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 OR5AK2Q8NH90 309 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 CEP76Q8TAP6 659 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 ADAM19Q9H013 955 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 SYT4Q9H2B2 425 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 PLEKHA1Q9HB21 404 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 TRBV5-5A0A0J9YX44 114 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 H3BSH0 61 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 HCRTR2O43614 444 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 TACSTD2P09758 323 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 PTH2RP49190 550 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 CCR9P51686 369 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 GNG2P59768 71 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 C1QL3Q5VWW1 255 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 OTPQ5XKR4 325 aa8.94□□□□□ -0.98
CLIP1-204ENST00000501271 SFRP4Q6FHJ7 346 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-204ENST00000501271 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms