RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	IFFO1	Q0D2I5	559 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	LARS2	Q15031	903 aa	Known RBP	11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	FXN	Q16595	210 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	GSG1	Q2KHT4	349 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	MS4A18	Q3C1V0	323 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	ALKBH6	Q3KRA9	238 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	SHQ1	Q6PI26	577 aa	Known RBP	11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	COMTD1	Q86VU5	262 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	C20orf196	Q8IYI0	205 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	PIK3C3	Q8NEB9	887 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	SGMS2	Q8NHU3	365 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF418	Q8TF45	676 aa	Predicted RBP	11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	VPS33A	Q96AX1	596 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	TXNDC15	Q96J42	360 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	MS4A5	Q9H3V2	200 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	HAO1	Q9UJM8	370 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	GRIP1	Q9Y3R0	1128 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	AIM2	O14862	343 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	PPIH	O43447	177 aa	Known RBP	11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	KRT75	O95678	551 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	TF	P02787	698 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	EPHA1	P21709	976 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	HTR2A	P28223	471 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	GTF2E2	P29084	291 aa	Known RBP	11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	GLRX	P35754	106 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	MAGEB1	P43366	347 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	GIPR	P48546	466 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	PTDSS1	P48651	473 aa	Known RBP	11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	DSTN	P60981	165 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	MPP2	Q14168	576 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF311	Q5JNZ3	666 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	NHLRC1	Q6VVB1	395 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF813	Q6ZN06	617 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	H1FNT	Q75WM6	255 aa	Predicted RBP	11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	CCDC36	Q8IYA8	594 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	OR51F2	Q8NH61	342 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	FGFBP3	Q8TAT2	258 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZBTB9	Q96C00	473 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	TPT1P8	Q9HAU6	139 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	ESM1	Q9NQ30	184 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	G6PC2	Q9NQR9	355 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	MED29	Q9NX70	200 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	CALML5	Q9NZT1	146 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	DUSP13	Q9UII6	198 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	PRDM4	Q9UKN5	801 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF232	Q9UNY5	417 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161	MGAM2	Q2M2H8	2515 aa		11.73	□□□□□ -0.53
SAMM50-204	ENST00000493161		A0A0G2JPF8	293 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	LOC102725191	A0A1B0GVB3	256 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	HNRNPCL2	B2RXH8	293 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	HNRNPCL3	B7ZW38	293 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	BIRC5	O15392	142 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	CDC14B	O60729	498 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	HNRNPCL1	O60812	293 aa	Known RBP	11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	PNP	P00491	289 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	PATE4	P0C8F1	98 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	HNRNPCL4	P0DMR1	293 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	B4GALT1	P15291	398 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	ADRA2C	P18825	462 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	EPHA3	P29320	983 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	ARFIP2	P53365	341 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	TMEM33	P57088	247 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	MFSD13A	Q14CX5	517 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	TRMT5	Q32P41	509 aa	Known RBP	11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	AVPI1	Q5T686	147 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	FAM69A	Q5T7M9	428 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	C6orf89	Q6UWU4	347 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF584	Q8IVC4	421 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	MAL2	Q969L2	176 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZMYND19	Q96E35	227 aa	Predicted RBP	11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	TSPAN32	Q96QS1	320 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	KLHL14	Q9P2G3	628 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	NOX1	Q9Y5S8	564 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	PKD1L1	Q8TDX9	2849 aa		11.72	□□□□□ -0.53
SAMM50-204	ENST00000493161	TRAV20	A0A0B4J274	112 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161		A0A1B0GWA3	101 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	TRIM77	I1YAP6	450 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	PLPP2	O43688	288 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	CLPTM1	O96005	669 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	VSNL1	P62760	191 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	RAB1A	P62820	205 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	MYBPC1	Q00872	1141 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	MVK	Q03426	396 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	LRRC74A	Q0VAA2	488 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	RAB39A	Q14964	217 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	USP43	Q70EL4	1123 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF627	Q7L945	461 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	UEVLD	Q8IX04	471 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	SLC38A4	Q969I6	547 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	SLC6A7	Q99884	636 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	TMPRSS13	Q9BYE2	586 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	POFUT2	Q9Y2G5	429 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	IFT52	Q9Y366	437 aa		11.71	□□□□□ -0.53
SAMM50-204	ENST00000493161	TRAV36DV7	A0A075B6V5	113 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161		A0A087WUJ7	227 aa		11.7	□□□□□ -0.54

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