RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 HNRNPA0Q13151 305 aaKnown RBP11□□□□□ -0.65
UBR4-213ENST00000483922 GSG1Q2KHT4 349 aa11□□□□□ -0.65
UBR4-213ENST00000483922 RPS26P11Q5JNZ5 115 aaPredicted RBP11□□□□□ -0.65
UBR4-213ENST00000483922 SHQ1Q6PI26 577 aaKnown RBP11□□□□□ -0.65
UBR4-213ENST00000483922 ZNF621Q6ZSS3 439 aa11□□□□□ -0.65
UBR4-213ENST00000483922 COMTD1Q86VU5 262 aa11□□□□□ -0.65
UBR4-213ENST00000483922 C20orf196Q8IYI0 205 aa11□□□□□ -0.65
UBR4-213ENST00000483922 ZNF440Q8IYI8 595 aa11□□□□□ -0.65
UBR4-213ENST00000483922 GPR137CQ8N3F9 429 aa11□□□□□ -0.65
UBR4-213ENST00000483922 PAQR4Q8N4S7 273 aaPredicted RBP11□□□□□ -0.65
UBR4-213ENST00000483922 SLC38A5Q8WUX1 472 aa11□□□□□ -0.65
UBR4-213ENST00000483922 C1orf147Q96MC9 270 aaPredicted RBP11□□□□□ -0.65
UBR4-213ENST00000483922 ZNF665Q9H7R5 613 aa11□□□□□ -0.65
UBR4-213ENST00000483922 ZNF443Q9Y2A4 671 aaPredicted RBP11□□□□□ -0.65
UBR4-213ENST00000483922 CACNG2Q9Y698 323 aa11□□□□□ -0.65
UBR4-213ENST00000483922 ARHGAP32A7KAX9 2087 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 LOC102725191A0A1B0GVB3 256 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 E9PBE3 544 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 M0R082 166 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 TYROBPO43914 113 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 HKR1P10072 659 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 CD79AP11912 226 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 CBLP22681 906 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 GRPRP30550 384 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 RBMXP38159 391 aaKnown RBP10.99□□□□□ -0.65
UBR4-213ENST00000483922 LIMS1P48059 325 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 GIPRP48546 466 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 RAB39AQ14964 217 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 CARD17Q5XLA6 110 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 ACSM5Q6NUN0 579 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 CCDC36Q8IYA8 594 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 PEX5LQ8IYB4 626 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 VPS37AQ8NEZ2 397 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 BHLHE22Q8NFJ8 381 aaPredicted RBP10.99□□□□□ -0.65
UBR4-213ENST00000483922 ZNF417Q8TAU3 575 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 GTF3AQ92664 365 aaKnown RBP10.99□□□□□ -0.65
UBR4-213ENST00000483922 LRRC58Q96CX6 371 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 PKNOX2Q96KN3 472 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 ZIM3Q96PE6 472 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 PANX1Q96RD7 426 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 ZNF587Q96SQ5 575 aaPredicted RBP10.99□□□□□ -0.65
UBR4-213ENST00000483922 SORT1Q99523 831 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 DUSP13Q9UII6 198 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 PRDM4Q9UKN5 801 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 PPIAL4AQ9Y536 164 aa10.99□□□□□ -0.65
UBR4-213ENST00000483922 AHSA1O95433 338 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 NUDT17P0C025 328 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 UQCRBP14927 111 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 ERVS71-1P61550 626 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 COPZ1P61923 177 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 RAB1AP62820 205 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 GNA13Q14344 377 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 MFSD13AQ14CX5 517 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 LIN52Q52LA3 116 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 TMEM255AQ5JRV8 349 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 RNF220Q5VTB9 566 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 WDR88Q6ZMY6 472 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 SKA3Q8IX90 412 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 LRRC34Q8IZ02 419 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 PIK3C3Q8NEB9 887 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 PPCSQ9HAB8 311 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 MED29Q9NX70 200 aa10.98□□□□□ -0.65
UBR4-213ENST00000483922 NOTCH1P46531 2555 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 WDR91A4D1P6 747 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 IGHV2-5P01817 119 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 BCHEP06276 602 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 NUDT7P0C024 238 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 CCL2P13500 99 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 B4GALT1P15291 398 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 HTR2AP28223 471 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 CRYBB2P43320 205 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 PTDSS1P48651 473 aaKnown RBP10.97□□□□□ -0.65
UBR4-213ENST00000483922 CCL8P80075 99 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 SCGB2A2Q13296 93 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 TRMT5Q32P41 509 aaKnown RBP10.97□□□□□ -0.65
UBR4-213ENST00000483922 GTDC1Q4AE62 458 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 ZNF311Q5JNZ3 666 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 SHISA2Q6UWI4 295 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 C6orf89Q6UWU4 347 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 ZNF813Q6ZN06 617 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 H1FNTQ75WM6 255 aaPredicted RBP10.97□□□□□ -0.65
UBR4-213ENST00000483922 VPS33AQ96AX1 596 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 SLC41A3Q96GZ6 507 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 LRR1Q96L50 414 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 DUX5Q96PT3 197 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 OR52E6Q96RD3 313 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 JMJD8Q96S16 334 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 WFDC6Q9BQY6 131 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 SPATA9Q9BWV2 254 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 SUCNR1Q9BXA5 334 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 NUF2Q9BZD4 464 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 ZNF385DQ9H6B1 395 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 SLC52A3Q9NQ40 469 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 PNPOQ9NVS9 261 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 TAAR3PQ9P1P4 343 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 LGALS13Q9UHV8 139 aa10.97□□□□□ -0.65
UBR4-213ENST00000483922 IGLV3-9A0A075B6K5 115 aa10.96□□□□□ -0.65
UBR4-213ENST00000483922 A0A096LPI6 279 aa10.96□□□□□ -0.65
UBR4-213ENST00000483922 C17orf100A8MU93 164 aa10.96□□□□□ -0.65
UBR4-213ENST00000483922 LRRN3E7EW58 273 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms