RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 NAV2Q8IVL1 2488 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 OR5H1A6NKK0 313 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 DEFB108AA8MXU0 73 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 CENPBD1B2RD01 187 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 ZNF587BE7ETH6 402 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 hCG_2039718K7EN88 272 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 LYZL6O75951 148 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 STAMBPO95630 424 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 IGHV3-9P01782 118 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 UMPSP11172 480 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 IFI30P13284 250 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 PAX7P23759 505 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 HMGA2P52926 109 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 LSM11P83369 360 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL2A1-206ENST00000483376 ZNF730Q6ZMV8 503 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 ZDHHC21Q8IVQ6 265 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 CDK20Q8IZL9 346 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 OR6X1Q8NH79 312 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 CLPTM1LQ96KA5 538 aa14.32□□□□□ -0.12
COL2A1-206ENST00000483376 CYSRT1A8MQ03 144 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 GSC2O15499 205 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 RNF13O43567 381 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 KRT36O76013 467 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 AHCYP23526 432 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 DNAJA1P31689 397 aaKnown RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 LIMS1P48059 325 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 NR1H2P55055 460 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 IL1RL1Q01638 556 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 RPL18Q07020 188 aaKnown RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 GK3PQ14409 553 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 TAF11Q15544 211 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 TAB1Q15750 504 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 GABRA6Q16445 453 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 FAM98BQ52LJ0 330 aaKnown RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 BEX5Q5H9J7 111 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 PODNL1Q6PEZ8 512 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 SEZ6L2Q6UXD5 910 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 SLC35D2Q76EJ3 337 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 RRM2BQ7LG56 351 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 HDDC2Q7Z4H3 204 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 C20orf196Q8IYI0 205 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 MAGEE2Q8TD90 523 aaPredicted RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 CCDC124Q96CT7 223 aaKnown RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 LRGUKQ96M69 825 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 SEPHS2Q99611 448 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 CADM1Q9BY67 442 aaKnown RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 NGBQ9NPG2 151 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 OBP2BQ9NPH6 170 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 KRCC1Q9NPI7 259 aaPredicted RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 STX18Q9P2W9 335 aaKnown RBP14.31□□□□□ -0.12
COL2A1-206ENST00000483376 V9GYQ6 96 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 CSMD2Q7Z408 3487 aa14.31□□□□□ -0.12
COL2A1-206ENST00000483376 SH3PXD2BA1X283 911 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 SLC35F4A4IF30 521 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 SIAH2O43255 324 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 KLF4O43474 513 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 PIP5K1CO60331 668 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 UPK3AO75631 287 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 GADD45GO95257 159 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 IGHMP01871 453 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 HOXB1P14653 301 aaPredicted RBP14.3□□□□□ -0.12
COL2A1-206ENST00000483376 IFNGR1P15260 489 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 MAKP20794 623 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 LOXP28300 417 aaPredicted RBP14.3□□□□□ -0.12
COL2A1-206ENST00000483376 OMPP47874 163 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 DAP3P51398 398 aaKnown RBP14.3□□□□□ -0.12
COL2A1-206ENST00000483376 FHL1Q13642 323 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 ANKRD34AQ69YU3 496 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 ZNF627Q7L945 461 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 SLC25A44Q96H78 314 aaPredicted RBP14.3□□□□□ -0.12
COL2A1-206ENST00000483376 TXNDC15Q96J42 360 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 LURAP1Q96LR2 239 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 ALKBH3Q96Q83 286 aaPredicted RBP14.3□□□□□ -0.12
COL2A1-206ENST00000483376 LRMDAQ9H2I8 198 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 CLEC4MQ9H2X3 399 aaPredicted RBP14.3□□□□□ -0.12
COL2A1-206ENST00000483376 MED29Q9NX70 200 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 ALPK2Q86TB3 2170 aa14.3□□□□□ -0.12
COL2A1-206ENST00000483376 LRBAP50851 2863 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 CSMD1Q96PZ7 3565 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 SPG11Q96JI7 2443 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 TRBV4-1A0A0J9YWV2 114 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 A0A1W2PRG6 482 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 CIB4A0PJX0 185 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 ZNF726A6NNF4 738 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 EFCAB9A8MZ26 197 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 C11orf98E9PRG8 122 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 BLOC1S5-TXNDC5H3BN57 136 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 KRT33AO76009 404 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 DIRAS1O95057 198 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 RAP2AP10114 183 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 SAGP10523 405 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-206ENST00000483376 RRM2P31350 389 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 AQP2P41181 271 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 FOXG1P55316 489 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-206ENST00000483376 PRPS1P60891 318 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 SPIBQ01892 262 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 CHRNB3Q05901 458 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 TSC22D1Q15714 1073 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 FGD3Q5JSP0 725 aa14.29□□□□□ -0.12
COL2A1-206ENST00000483376 TBPL2Q6SJ96 375 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms