RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ZNF432O94892 652 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 THBDP07204 575 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 ITGA5P08648 1049 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 SPIBQ01892 262 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 C9orf135Q5VTT2 229 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 ALKBH2Q6NS38 261 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 SLC35D2Q76EJ3 337 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 HDDC2Q7Z4H3 204 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 ZDHHC21Q8IVQ6 265 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 SLC7A6OSQ96CW6 309 aaPredicted RBP18.04■□□□□ 0.48
VARS-224ENST00000479051 OR2M2Q96R28 347 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 SEPHS2Q99611 448 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 NDEL1Q9GZM8 345 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 MAGIXQ9H6Y5 334 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 MED29Q9NX70 200 aa18.04■□□□□ 0.48
VARS-224ENST00000479051 SLC35F4A4IF30 521 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 OR5H1A6NKK0 313 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 EFCAB9A8MZ26 197 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 UPK3AO75631 287 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 DIRAS1O95057 198 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 GADD45GO95257 159 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 HRGP04196 525 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 IFNGR1P15260 489 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 SLC9A3P48764 834 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 NR1H2P55055 460 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 SH3BGRP55822 239 aaPredicted RBP18.03■□□□□ 0.48
VARS-224ENST00000479051 BIDP55957 195 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 MS4A2Q01362 244 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 CHRNB3Q05901 458 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 RPL18Q07020 188 aaKnown RBP18.03■□□□□ 0.48
VARS-224ENST00000479051 PPA1Q15181 289 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 TAB1Q15750 504 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 ANKDD1AQ495B1 522 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 FAM98BQ52LJ0 330 aaKnown RBP18.03■□□□□ 0.48
VARS-224ENST00000479051 C1QTNF12Q5T7M4 302 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 CARD17Q5XLA6 110 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 PODNL1Q6PEZ8 512 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 C17orf78Q8N4C9 275 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 SLC7A13Q8TCU3 470 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 PIK3IP1Q96FE7 263 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 LRR1Q96L50 414 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 DHRS1Q96LJ7 313 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 EMC6Q9BV81 110 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 EDARQ9UNE0 448 aa18.03■□□□□ 0.48
VARS-224ENST00000479051 DCHS2Q6V1P9 2916 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 DEFB108AA8MXU0 73 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 MCIDASD6RGH6 385 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 BCL10O95999 233 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 CDH2P19022 906 aaPredicted RBP18.02■□□□□ 0.48
VARS-224ENST00000479051 AQP2P41181 271 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 DAP3P51398 398 aaKnown RBP18.02■□□□□ 0.48
VARS-224ENST00000479051 ROR2Q01974 943 aaKnown RBP18.02■□□□□ 0.48
VARS-224ENST00000479051 TAF11Q15544 211 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 GABRA6Q16445 453 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 KLHL24Q6TFL4 600 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 C22orf34Q6ZV56 151 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 OAFQ86UD1 273 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 TMEM123Q8N131 208 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 OR6N1Q8NGY5 312 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 OR52J3Q8NH60 311 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 OR6X1Q8NH79 312 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 TXNDC15Q96J42 360 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 MUS81Q96NY9 551 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 INIPQ9NRY2 104 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 STX18Q9P2W9 335 aaKnown RBP18.02■□□□□ 0.48
VARS-224ENST00000479051 TMCC3Q9ULS5 477 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 HIF3AQ9Y2N7 669 aa18.02■□□□□ 0.48
VARS-224ENST00000479051 ITPR2Q14571 2701 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 TCRBV5S2A0A599 114 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 RPL36A-HNRNPH2H7BZ11 118 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 KRT36O76013 467 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 MAKP20794 623 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 FUT4P22083 530 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 CSNK1A1P48729 337 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 FOXG1P55316 489 aaPredicted RBP18.01■□□□□ 0.47
VARS-224ENST00000479051 KRTAP10-9P60411 292 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 LGALS3BPQ08380 585 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 CAMK2DQ13557 499 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 TBPL2Q6SJ96 375 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 TMPRSS11FQ6ZWK6 438 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 PIWIL3Q7Z3Z3 882 aaKnown RBP18.01■□□□□ 0.47
VARS-224ENST00000479051 CDC20BQ86Y33 519 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 C20orf196Q8IYI0 205 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 ESRP2Q9H6T0 727 aaKnown RBP18.01■□□□□ 0.47
VARS-224ENST00000479051 AURKCQ9UQB9 309 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 AMDHD2Q9Y303 409 aa18.01■□□□□ 0.47
VARS-224ENST00000479051 MAGED1Q9Y5V3 778 aaPredicted RBP18.01■□□□□ 0.47
VARS-224ENST00000479051 NOTCH2Q04721 2471 aa18■□□□□ 0.47
VARS-224ENST00000479051 ABCA12Q86UK0 2595 aa18■□□□□ 0.47
VARS-224ENST00000479051 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18■□□□□ 0.47
VARS-224ENST00000479051 AQP12BA6NM10 295 aa18■□□□□ 0.47
VARS-224ENST00000479051 M0R3G1 203 aa18■□□□□ 0.47
VARS-224ENST00000479051 CLOCKO15516 846 aa18■□□□□ 0.47
VARS-224ENST00000479051 TSPAN19P0C672 248 aa18■□□□□ 0.47
VARS-224ENST00000479051 HOXB6P17509 224 aaKnown RBP18■□□□□ 0.47
VARS-224ENST00000479051 RRM2P31350 389 aa18■□□□□ 0.47
VARS-224ENST00000479051 IFNGR2P38484 337 aa18■□□□□ 0.47
VARS-224ENST00000479051 GPR4P46093 362 aa18■□□□□ 0.47
VARS-224ENST00000479051 LSM11P83369 360 aaKnown RBP eCLIP18■□□□□ 0.47
VARS-224ENST00000479051 FLOT2Q14254 428 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms