RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 MAGEA2P43356 314 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 OR1E2P47887 323 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 LTBQ06643 244 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 DGCR6Q14129 220 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 PPA1Q15181 289 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 C3orf36Q3SXR2 165 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 SEZ6L2Q6UXD5 910 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 CYP2R1Q6VVX0 501 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 DEF8Q6ZN54 512 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 C22orf34Q6ZV56 151 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF627Q7L945 461 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 PIWIL3Q7Z3Z3 882 aaKnown RBP10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 VTCN1Q7Z7D3 282 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 TMEM123Q8N131 208 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 FAM86B1Q8N7N1 296 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 ACOT11Q8WXI4 607 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 C7orf34Q96L11 122 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 MOGAT1Q96PD6 335 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 PIP5K1AQ99755 562 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 MEPEQ9NQ76 525 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 MGAT4BQ9UQ53 548 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 ENPP4Q9Y6X5 453 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
CLCNKA-205ENST00000477360 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 CIB4A0PJX0 185 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 SIAH2O43255 324 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 LYZL6O75951 148 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 PRSS23O95084 383 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 WNT11O96014 354 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 RHCEP18577 417 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 DNASE1P24855 282 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC9A3P48764 834 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 CLDN17P56750 224 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 SMIM11AP58511 58 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 ACTR3P61158 418 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 TAF11Q15544 211 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 NCMAPQ5T1S8 102 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 C1orf146Q5VVC0 180 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 ANKRD34AQ69YU3 496 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 NIPAL3Q6P499 406 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 KLHL17Q6TDP4 642 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 TMEM108Q6UXF1 575 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 SPNS3Q6ZMD2 512 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 FKBP9P1Q75LS8 142 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 TSEN54Q7Z6J9 526 aaKnown RBP10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 ADGRG5Q8IZF4 528 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 C10orf53Q8N6V4 93 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 PAPD5Q8NDF8 572 aaKnown RBP10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 OR6X1Q8NH79 312 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 SGTBQ96EQ0 304 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 DNAJA3Q96EY1 480 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 ALPK1Q96QP1 1244 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 OR2M2Q96R28 347 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 FOXC2Q99958 501 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 FNDC11Q9BVV2 318 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 CXXC4Q9H2H0 198 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 IL1RAPQ9NPH3 570 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC17A5Q9NRA2 495 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC25A15Q9Y619 301 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 FREM1Q5H8C1 2179 aa10.87□□□□□ -0.67
CLCNKA-205ENST00000477360 ARPC4-TTLL3A0A0A6YYG9 625 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF726A6NNF4 738 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 KRT33AO76009 404 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 CH25HO95992 272 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 ADORA3P0DMS8 318 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 RAP2AP10114 183 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 NR2C1P13056 603 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 TNFRSF1BP20333 461 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 PTAFRP25105 342 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 HOXC12P31275 282 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 SELENOPP49908 381 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 VLDLRP98155 873 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 TESK1Q15569 626 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 NRN1LQ496H8 165 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 FAM98BQ52LJ0 330 aaKnown RBP10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 ANKRD16Q6P6B7 361 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC46A3Q7Z3Q1 461 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 NANOGNBQ7Z5D8 188 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 P3H2Q8IVL5 708 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 NKAIN4Q8IVV8 208 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 C20orf196Q8IYI0 205 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 C10orf67Q8IYJ2 551 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 PIGTQ969N2 578 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 PIK3IP1Q96FE7 263 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 DHRS1Q96LJ7 313 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 GRIP2Q9C0E4 1043 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 DENND2DQ9H6A0 471 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 MAN2C1Q9NTJ4 1040 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 BEX4Q9NWD9 120 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 TAS2R5Q9NYW4 299 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 SEC14L4Q9UDX3 406 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 TMEM5Q9Y2B1 443 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 HIF3AQ9Y2N7 669 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 FAM32AQ9Y421 112 aaKnown RBP10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 RNF115Q9Y4L5 304 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 OTOGQ6ZRI0 2925 aa10.86□□□□□ -0.67
CLCNKA-205ENST00000477360 DHRS12A0PJE2 317 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 FFAR1O14842 300 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 RAD51DO75771 328 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms