RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SLC25A35Q3KQZ1 300 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 ZBED5Q49AG3 693 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 TSPO2Q5TGU0 170 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 CARD17Q5XLA6 110 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 NIPAL3Q6P499 406 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 CASP12Q6UXS9 341 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 SLC35D2Q76EJ3 337 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 LINGO2Q7L985 606 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 PXKQ7Z7A4 578 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 UEVLDQ8IX04 471 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 ZNF100Q8IYN0 542 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 CDK20Q8IZL9 346 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 AQP11Q8NBQ7 271 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 GIPC3Q8TF64 312 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 GTPBP3Q969Y2 492 aaKnown RBP14.04□□□□□ -0.16
COPS3-207ENST00000477299 PSMG3-AS1Q96PY0 264 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 NIPSNAP1Q9BPW8 284 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 FANCFQ9NPI8 374 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 SLC7A10Q9NS82 523 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 EMC3Q9P0I2 261 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 PDP1Q9P0J1 537 aaPredicted RBP14.04□□□□□ -0.16
COPS3-207ENST00000477299 SIGLEC7Q9Y286 467 aa14.04□□□□□ -0.16
COPS3-207ENST00000477299 MSTNO14793 375 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 HNRNPRO43390 633 aaKnown RBP14.03□□□□□ -0.16
COPS3-207ENST00000477299 MRPL33O75394 65 aaKnown RBP14.03□□□□□ -0.16
COPS3-207ENST00000477299 UPK3AO75631 287 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 TP53P04637 393 aaPredicted RBP14.03□□□□□ -0.16
COPS3-207ENST00000477299 DNAJA1P31689 397 aaKnown RBP14.03□□□□□ -0.16
COPS3-207ENST00000477299 BIDP55957 195 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 CTXN1P60606 82 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 DBPQ10586 325 aaPredicted RBP14.03□□□□□ -0.16
COPS3-207ENST00000477299 CAMK2DQ13557 499 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 C22orf34Q6ZV56 151 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 OR10G2Q8NGC3 310 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 GNPDA2Q8TDQ7 276 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 TMEM45BQ96B21 275 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 FEVQ99581 238 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 RBM24Q9BX46 236 aaKnown RBP14.03□□□□□ -0.16
COPS3-207ENST00000477299 PIGMQ9H3S5 423 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 YY1AP1Q9H869 796 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 S100A14Q9HCY8 104 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 TMEM5Q9Y2B1 443 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 ADAM18Q9Y3Q7 739 aa14.03□□□□□ -0.16
COPS3-207ENST00000477299 USP9YO00507 2555 aaPredicted RBP14.03□□□□□ -0.16
COPS3-207ENST00000477299 E2F6O75461 281 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 FASP25445 335 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 SLC9A3P48764 834 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 ASCL1P50553 236 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 ERVK-25P63136 954 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 ACKR1Q16570 336 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 ALG10Q5BKT4 473 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 C9orf135Q5VTT2 229 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 TMEM123Q8N131 208 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 CLDN22Q8N7P3 220 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 APH1AQ96BI3 265 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 ZNF837Q96EG3 531 aaPredicted RBP14.02□□□□□ -0.17
COPS3-207ENST00000477299 SAMD8Q96LT4 415 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 OR2M2Q96R28 347 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 PLA2G12AQ9BZM1 189 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 EGLN3Q9H6Z9 239 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 INIPQ9NRY2 104 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 ZNF346Q9UL40 294 aaKnown RBP14.02□□□□□ -0.17
COPS3-207ENST00000477299 NOX1Q9Y5S8 564 aa14.02□□□□□ -0.17
COPS3-207ENST00000477299 HTR3EA5X5Y0 456 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 PRSS44E7EML9 344 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 IMPA2O14732 288 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 DEAF1O75398 565 aaPredicted RBP14.01□□□□□ -0.17
COPS3-207ENST00000477299 ADAP00813 363 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 FPR3P25089 353 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 FAPQ12884 760 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 TSPAN31Q12999 210 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 TOP3AQ13472 1001 aaPredicted RBP14.01□□□□□ -0.17
COPS3-207ENST00000477299 KLHL17Q6TDP4 642 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 CXorf67Q86X51 503 aaPredicted RBP14.01□□□□□ -0.17
COPS3-207ENST00000477299 GABRG1Q8N1C3 465 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 UBE2J2Q8N2K1 259 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 ANKK1Q8NFD2 765 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 OR8D4Q8NGM9 314 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 TSPAN32Q96QS1 320 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 TACO1Q9BSH4 297 aaKnown RBP14.01□□□□□ -0.17
COPS3-207ENST00000477299 OR52D1Q9H346 318 aa14.01□□□□□ -0.17
COPS3-207ENST00000477299 SAC3D1A6NKF1 404 aa14□□□□□ -0.17
COPS3-207ENST00000477299 PDLIM1O00151 329 aa14□□□□□ -0.17
COPS3-207ENST00000477299 SOX14O95416 240 aa14□□□□□ -0.17
COPS3-207ENST00000477299 IGHV1-2P23083 117 aa14□□□□□ -0.17
COPS3-207ENST00000477299 CCKARP32238 428 aa14□□□□□ -0.17
COPS3-207ENST00000477299 DAPP51397 102 aa14□□□□□ -0.17
COPS3-207ENST00000477299 FBXL19-AS1Q494R0 122 aa14□□□□□ -0.17
COPS3-207ENST00000477299 ARMC4Q5T2S8 1044 aa14□□□□□ -0.17
COPS3-207ENST00000477299 FBXW9Q5XUX1 488 aa14□□□□□ -0.17
COPS3-207ENST00000477299 SHQ1Q6PI26 577 aaKnown RBP14□□□□□ -0.17
COPS3-207ENST00000477299 STAC2Q6ZMT1 411 aa14□□□□□ -0.17
COPS3-207ENST00000477299 OR5K1Q8NHB7 308 aa14□□□□□ -0.17
COPS3-207ENST00000477299 LINC01560Q8TB33 94 aa14□□□□□ -0.17
COPS3-207ENST00000477299 ASB10Q8WXI3 467 aa14□□□□□ -0.17
COPS3-207ENST00000477299 RNASE6Q93091 150 aaKnown RBP14□□□□□ -0.17
COPS3-207ENST00000477299 Q96M85 177 aa14□□□□□ -0.17
COPS3-207ENST00000477299 KATNB1Q9BVA0 655 aa14□□□□□ -0.17
COPS3-207ENST00000477299 DGCR6LQ9BY27 220 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms