RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TXNDC15Q96J42 360 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 LRR1Q96L50 414 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 LRGUKQ96M69 825 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ADAD1Q96M93 576 aaKnown RBP13.46□□□□□ -0.25
SDC3-203ENST00000471567 OR2M2Q96R28 347 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 POLDIP3Q9BY77 421 aaKnown RBP13.46□□□□□ -0.25
SDC3-203ENST00000471567 TRIM15Q9C019 465 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 MAGIXQ9H6Y5 334 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 TMEM5Q9Y2B1 443 aa13.46□□□□□ -0.25
SDC3-203ENST00000471567 ABCA12Q86UK0 2595 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 SLC35F4A4IF30 521 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 OR5H1A6NKK0 313 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 DEFB108AA8MXU0 73 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 RPL36A-HNRNPH2H7BZ11 118 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 UPK3AO75631 287 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 RAD51DO75771 328 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 DIRAS1O95057 198 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 IFNGR1P15260 489 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 SLC9A3P48764 834 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 FOXG1P55316 489 aaPredicted RBP13.45□□□□□ -0.26
SDC3-203ENST00000471567 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.26
SDC3-203ENST00000471567 RPL18Q07020 188 aaKnown RBP13.45□□□□□ -0.26
SDC3-203ENST00000471567 TAB1Q15750 504 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 GABRA6Q16445 453 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 BEX5Q5H9J7 111 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 PODNL1Q6PEZ8 512 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 TBPL2Q6SJ96 375 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 TMPRSS11FQ6ZWK6 438 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 SLC35D2Q76EJ3 337 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 GPR137CQ8N3F9 429 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 C17orf78Q8N4C9 275 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 OR6X1Q8NH79 312 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 CCDC124Q96CT7 223 aaKnown RBP13.45□□□□□ -0.26
SDC3-203ENST00000471567 MUCL1Q96DR8 90 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 LURAP1Q96LR2 239 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 SEPHS2Q99611 448 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 FUZQ9BT04 418 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 CLEC4MQ9H2X3 399 aaPredicted RBP13.45□□□□□ -0.26
SDC3-203ENST00000471567 NGBQ9NPG2 151 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 INIPQ9NRY2 104 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 MED29Q9NX70 200 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 HIF3AQ9Y2N7 669 aa13.45□□□□□ -0.26
SDC3-203ENST00000471567 NPIPB13A6NJU9 1138 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 AQP12BA6NM10 295 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 EFCAB9A8MZ26 197 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 NPIPB4C9JG80 1138 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 GSC2O15499 205 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 KLF4O43474 513 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 GADD45GO95257 159 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 SAGP10523 405 aaPredicted RBP13.44□□□□□ -0.26
SDC3-203ENST00000471567 HOXB6P17509 224 aaKnown RBP13.44□□□□□ -0.26
SDC3-203ENST00000471567 MAKP20794 623 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 AQP2P41181 271 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 MAGEA2P43356 314 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 SH3BGRP55822 239 aaPredicted RBP13.44□□□□□ -0.26
SDC3-203ENST00000471567 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 SPIBQ01892 262 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 CHRNB3Q05901 458 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 PPA1Q15181 289 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 FAM98BQ52LJ0 330 aaKnown RBP13.44□□□□□ -0.26
SDC3-203ENST00000471567 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 FBXW10Q5XX13 1052 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 HMBOX1Q6NT76 420 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 WFDC8Q8IUA0 241 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 AQP12AQ8IXF9 295 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 C20orf196Q8IYI0 205 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 EMC6Q9BV81 110 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 CADM1Q9BY67 442 aaKnown RBP13.44□□□□□ -0.26
SDC3-203ENST00000471567 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
SDC3-203ENST00000471567 B3GAT2Q9NPZ5 323 aa13.44□□□□□ -0.26
SDC3-203ENST00000471567 ABCA4P78363 2273 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 APCP25054 2843 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 TRBV4-1A0A0J9YWV2 114 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 A0A1W2PRG6 482 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 SIAH2O43255 324 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 SERPINI2O75830 405 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 KRT36O76013 467 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 BCL10O95999 233 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 NR1H2P55055 460 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 BIDP55957 195 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 RPS4XP62701 263 aaKnown RBP13.43□□□□□ -0.26
SDC3-203ENST00000471567 ROR2Q01974 943 aaKnown RBP13.43□□□□□ -0.26
SDC3-203ENST00000471567 LGALS3BPQ08380 585 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 TAF11Q15544 211 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 STK11Q15831 433 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 C9orf135Q5VTT2 229 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 DCHS2Q6V1P9 2916 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 LINGO2Q7L985 606 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 HDDC2Q7Z4H3 204 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 ALPK2Q86TB3 2170 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 OAFQ86UD1 273 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 CDC20BQ86Y33 519 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 OR4K5Q8NGD3 323 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 OR52J3Q8NH60 311 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 MOSPD2Q8NHP6 518 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 ALKBH3Q96Q83 286 aaPredicted RBP13.43□□□□□ -0.26
SDC3-203ENST00000471567 MMADHCQ9H3L0 296 aaPredicted RBP13.43□□□□□ -0.26
SDC3-203ENST00000471567 GPR35Q9HC97 309 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 OBP2BQ9NPH6 170 aa13.43□□□□□ -0.26
SDC3-203ENST00000471567 STX18Q9P2W9 335 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms