RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PILRAQ9UKJ1 303 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TRAV18A0A075B6X5 111 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3DA0A087WVF3 549 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3IA0A087WXS9 549 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3KA0A087X1G2 549 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3FA6NER0 549 aaPredicted RBP11.36□□□□□ -0.59
HDAC4-208ENST00000463007 ZNF879B4DU55 563 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3LB9A6J9 549 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TOR1AO14656 332 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 SERPINA3P01011 423 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3HP0C7X1 549 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 NID1P14543 1247 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 BDH1Q02338 343 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 NFATC4Q14934 902 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 AKIRIN2Q53H80 203 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 EIPR1Q53HC9 387 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3GQ6DHY5 549 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3CQ6IPX1 549 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 FBXO42Q6P3S6 717 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 LRRN1Q6UXK5 716 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TBC1D3Q8IZP1 549 aaPredicted RBP11.36□□□□□ -0.59
HDAC4-208ENST00000463007 ESX1Q8N693 406 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 THEM6Q8WUY1 208 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 TSACCQ96A04 125 aaPredicted RBP11.36□□□□□ -0.59
HDAC4-208ENST00000463007 GAL3ST3Q96A11 431 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 OR2A5Q96R48 311 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 EXO5Q9H790 373 aa11.36□□□□□ -0.59
HDAC4-208ENST00000463007 CTSVO60911 334 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 NAGAP17050 411 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 TLX1P31314 330 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 CTHP32929 405 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 DLX2Q07687 328 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 SCGB2B2Q4G0G5 96 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 LEG1Q6P5S2 330 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 GLDNQ6ZMI3 551 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 MUC20Q8N307 709 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 METTL27Q8N6F8 245 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 PPP1R14AQ96A00 147 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 ADAD1Q96M93 576 aaKnown RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 ELF4Q99607 663 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 MFFQ9GZY8 342 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 SRMSQ9H3Y6 488 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 TMEM185BQ9H7F4 350 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-208ENST00000463007 TAS2R3Q9NYW6 316 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 FBXO4Q9UKT5 387 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 PLSCR5A0PG75 271 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 FAM74A7A6NL05 159 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 M0QYG6 137 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 HRKO00198 91 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 OR10H2O60403 315 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 HLA-DQA2P01906 255 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 SLC6A6P31641 620 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 EFNB2P52799 333 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 FAM74A3Q4VXF1 159 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 ZNF676Q8N7Q3 588 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 AIFM2Q9BRQ8 373 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 REG4Q9BYZ8 158 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 ANKRD10Q9NXR5 420 aa11.35□□□□□ -0.59
HDAC4-208ENST00000463007 SHISA7A6NL88 538 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 GABARAPH6UMI1 98 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 SC5DO75845 299 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 IFNA16P05015 189 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 STARP49675 285 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ART1P52961 327 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 RPS15AP62244 130 aaKnown RBP11.34□□□□□ -0.59
HDAC4-208ENST00000463007 NKPD1Q17RQ9 610 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ARHGAP11BQ3KRB8 267 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 FHL5Q5TD97 284 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 FCRL6Q6DN72 434 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 OR4C16Q8NGL9 310 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 RADILQ96JH8 1075 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ANKRD19PQ9H560 264 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 COLEC10Q9Y6Z7 277 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 TRAV8-7A0A075B6U6 113 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 SDC3O75056 442 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 RBBP9O75884 186 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 DBIP07108 87 aaKnown RBP11.34□□□□□ -0.59
HDAC4-208ENST00000463007 HOXB2P14652 356 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 UGT2B7P16662 529 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 TPMTP51580 245 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 TAS2R20P59543 309 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 AP3S2P59780 193 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 TNFRSF17Q02223 184 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 DUSP8Q13202 625 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 GAS6Q14393 721 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 TAF13Q15543 124 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ZNF542PQ5EBM4 170 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 LRRC69Q6ZNQ3 347 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 DGAT2L6Q6ZPD8 337 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 SLC35D2Q76EJ3 337 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 ZNF627Q7L945 461 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 PDZD9Q8IXQ8 264 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 OR2L13Q8N349 312 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 HAVCR2Q8TDQ0 301 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 SLC25A28Q96A46 364 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 MRGPRX1Q96LB2 322 aa11.34□□□□□ -0.59
HDAC4-208ENST00000463007 MED11Q9P086 117 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms