RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 NKX3-1Q99801 234 aaPredicted RBP3.56□□□□□ -1.84
CDKN3-205ENST00000458126 ACAT2Q9BWD1 397 aa3.56□□□□□ -1.84
CDKN3-205ENST00000458126 ZNF350Q9GZX5 532 aa3.56□□□□□ -1.84
CDKN3-205ENST00000458126 ALX4Q9H161 411 aaPredicted RBP3.56□□□□□ -1.84
CDKN3-205ENST00000458126 REEP1Q9H902 201 aa3.56□□□□□ -1.84
CDKN3-205ENST00000458126 NT5MQ9NPB1 228 aa3.56□□□□□ -1.84
CDKN3-205ENST00000458126 OR6C3Q9NZP0 311 aa3.56□□□□□ -1.84
CDKN3-205ENST00000458126 NOL7Q9UMY1 257 aaKnown RBP3.56□□□□□ -1.84
CDKN3-205ENST00000458126 CMAHPQ9Y471 501 aa3.56□□□□□ -1.84
CDKN3-205ENST00000458126 NUP214P35658 2090 aaPredicted RBP3.55□□□□□ -1.84
CDKN3-205ENST00000458126 IGLV2-18A0A075B6J9 118 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 OR2M5A3KFT3 312 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 CBY3A6NI87 242 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 B4DXG7 233 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 PDXKO00764 312 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 IMPA2O14732 288 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 MED7O43513 233 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 CXCL13O43927 109 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 CEP104O60308 925 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 GAGE7O76087 117 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 AIFM1O95831 613 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 RPN2P04844 631 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 ALDOBP05062 364 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 SPARCP09486 303 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 GAGE12FP0CL80 117 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 GAGE12GP0CL81 117 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 GAGE12IP0CL82 117 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 TFPIP10646 304 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 ETS2P15036 469 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 ALOX12P18054 663 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 FEN1P39748 380 aaKnown RBP3.55□□□□□ -1.84
CDKN3-205ENST00000458126 DSCR4P56555 118 aaPredicted RBP3.55□□□□□ -1.84
CDKN3-205ENST00000458126 SNX16P57768 344 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 RPL23AP62750 156 aaKnown RBP3.55□□□□□ -1.84
CDKN3-205ENST00000458126 SLC3A1Q07837 685 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 DLG1Q12959 904 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 GAGE1Q13065 139 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 GAGE4Q13068 117 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 MAD2L1BPQ15013 274 aaPredicted RBP3.55□□□□□ -1.84
CDKN3-205ENST00000458126 PTPN20Q4JDL3 420 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 BLOC1S2Q6QNY1 142 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 BBS12Q6ZW61 710 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 CCDC65Q8IXS2 484 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 SLC26A10Q8NG04 563 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 RFWD2Q8NHY2 731 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 ARRDC2Q8TBH0 407 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 NPRL2Q8WTW4 380 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 SNAPC3Q92966 411 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 LHX4Q969G2 390 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 ZSCAN31Q96LW9 406 aaPredicted RBP3.55□□□□□ -1.84
CDKN3-205ENST00000458126 DUX3Q96PT4 197 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 WWTR1Q9GZV5 400 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 NANSQ9NR45 359 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 PRTFDC1Q9NRG1 225 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 NKIRAS2Q9NYR9 191 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 CEPT1Q9Y6K0 416 aa3.55□□□□□ -1.84
CDKN3-205ENST00000458126 A0A087WYN8 130 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 MAGEA13PA6NCF6 341 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 ADAMDEC1O15204 470 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 PRPSAP2O60256 369 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 SH3BGRLO75368 114 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 TFAP2AP05549 437 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 CECR9P0C854 216 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 UROSP10746 265 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 PCNAP12004 261 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 CPT2P23786 658 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 TPI1P60174 286 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 PRPS1P60891 318 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 GALK2Q01415 458 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 PRDX1Q06830 199 aaKnown RBP3.54□□□□□ -1.84
CDKN3-205ENST00000458126 PCGF3Q3KNV8 242 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 FBXW9Q5XUX1 488 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 ARCQ7LC44 396 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 OR2W3Q7Z3T1 314 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.54□□□□□ -1.84
CDKN3-205ENST00000458126 ZNF329Q86UD4 541 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 ZNF429Q86V71 674 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 SMC5Q8IY18 1101 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 GBP7Q8N8V2 638 aaPredicted RBP3.54□□□□□ -1.84
CDKN3-205ENST00000458126 OR4K1Q8NGD4 311 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 ZNF606Q8WXB4 792 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 TRIM63Q969Q1 353 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 RHBGQ9H310 441 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 SLA2Q9H6Q3 261 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 KLRF1Q9NZS2 232 aa3.54□□□□□ -1.84
CDKN3-205ENST00000458126 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.54□□□□□ -1.84
CDKN3-205ENST00000458126 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 SAA2-SAA4A0A096LPE2 208 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 NKX6-3A6NJ46 265 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 OR6C65A6NJZ3 312 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 ZNF879B4DU55 563 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 CCL24O00175 119 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 HSPA12AO43301 675 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 NDUFB4O95168 129 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 SBK2P0C263 348 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 RAB13P51153 203 aa3.53□□□□□ -1.84
CDKN3-205ENST00000458126 HNRNPFP52597 415 aaKnown RBP3.53□□□□□ -1.84
CDKN3-205ENST00000458126 CDH6P55285 790 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms