RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 NUAK2Q9H093 628 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF160Q9HCG1 818 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 AKIP1Q9NQ31 210 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 TAS2R5Q9NYW4 299 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 FBXL4Q9UKA2 621 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 POLHQ9Y253 713 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 VDAC3Q9Y277 283 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 PMF1-BGLAPU3KQ54 211 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 KIF26BQ2KJY2 2108 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 PIEZO1Q92508 2521 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 PNMA8CA0A1B0GUJ8 204 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 A0A1W2PRG6 482 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 A6NIZ1 184 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 C4orf47A7E2U8 309 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 C17orf51A8MQB3 221 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 C9orf172C9J069 976 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 TAF4O00268 1085 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 SERPINI2O75830 405 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 AHCYP23526 432 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 F8A1P23610 371 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 GRPRP30550 384 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 OTX2P32243 289 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 IDUAP35475 653 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 CDKN2AP42771 156 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 MLF1P58340 268 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 RAP1BP61224 184 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 RPL27P61353 136 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 RAP1AP62834 184 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 RPS25P62851 125 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF85Q03923 595 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 FOXF1Q12946 379 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 CHAF1BQ13112 559 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 PLPPR5Q32ZL2 321 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 SOWAHCQ53LP3 525 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 FAM205BPQ63HN1 556 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 C3orf33Q6P1S2 294 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 IL20RBQ6UXL0 311 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 PPP1R32Q7Z5V6 425 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 GLRX5Q86SX6 157 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 ARIH2OSQ8N7S6 290 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 FADS6Q8N9I5 356 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 OR6K6Q8NGW6 343 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 ZBTB8AQ96BR9 441 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 SGCZQ96LD1 299 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 CDADC1Q9BWV3 514 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 ANGPTL4Q9BY76 406 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 C6orf62Q9GZU0 229 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 TXNIPQ9H3M7 391 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 CDCP1Q9H5V8 836 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 RNF167Q9H6Y7 350 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 RPRD1BQ9NQG5 326 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 HPF1Q9NWY4 346 aa9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF346Q9UL40 294 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 CHCHD2Q9Y6H1 151 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-203ENST00000448935 PCNX3Q9H6A9 2034 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 hCG_2014768A0A024R1R8 64 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 A0A1W2PQL4 384 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 NPIPB13A6NJU9 1138 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 NPIPB4C9JG80 1138 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 FTCDNL1E5RQL4 147 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 C11orf98E9PRG8 122 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 J3QLW9 94 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PLPP3O14495 311 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PHYHO14832 338 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ARHGEF9O43307 516 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PLPP2O43688 288 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 LALBAP00709 142 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF19P17023 458 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CD79BP40259 229 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 GBX2P52951 348 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 MRPL28Q13084 256 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 DNASE1L3Q13609 305 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 INAQ16352 499 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 MESTQ5EB52 335 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 C1QL3Q5VWW1 255 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SLC22A10Q63ZE4 541 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 BICRALQ6AI39 1079 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 C22orf42Q6IC83 251 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ARSKQ6UWY0 536 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 H1FNTQ75WM6 255 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SLC16A9Q7RTY1 509 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 KCTD20Q7Z5Y7 419 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ZBTB46Q86UZ6 589 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 RAB43Q86YS6 212 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PLCZ1Q86YW0 608 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 MS4A15Q8N5U1 240 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 NLGN4YQ8NFZ3 816 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PAQR8Q8TEZ7 354 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SNX33Q8WV41 574 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 THAP4Q8WY91 577 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 AP3S1Q92572 193 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TMEM203Q969S6 136 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 NXPE2Q96DL1 559 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 C4orf36Q96KX1 117 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ALKBH4Q9NXW9 302 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 GALNT8Q9NY28 637 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 B3GALT5Q9Y2C3 310 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 FKBP7Q9Y680 259 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TMEM14AQ9Y6G1 99 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms