RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CTPS2Q9NRF8 586 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 MAN2C1Q9NTJ4 1040 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 C6orf203Q9P0P8 240 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-206ENST00000441089 RHCGQ9UBD6 479 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 ACAD8Q9UKU7 415 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 BAG5Q9UL15 447 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 A4GNTQ9UNA3 340 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 IFT52Q9Y366 437 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 DTNAQ9Y4J8 743 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 ENPP4Q9Y6X5 453 aa4.26□□□□□ -1.73
PTPN4-206ENST00000441089 A0A1W2PQD3 144 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 OR6C70A6NIJ9 312 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SAC3D1A6NKF1 404 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 CPSF4LA6NMK7 179 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ALG1L2C9J202 215 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 PDLIM1O00151 329 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 DLGAP1O14490 977 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SCO2O43819 266 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 PEX1O43933 1283 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 CST1P01037 141 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 IFNW1P05000 195 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 NGFRP08138 427 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF26P17031 533 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 NAGAP17050 411 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 TBXA2RP21731 343 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 FASP25445 335 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 IL12BP29460 328 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 LCN1P31025 176 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 RRM2P31350 389 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 EVI2BP34910 448 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 GCKP35557 465 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 RFC3P40938 356 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 PTDSS1P48651 473 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 HLCSP50747 726 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 PSMD4P55036 377 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SPIBQ01892 262 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF117Q03924 483 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 EPS8Q12929 822 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SKP2Q13309 424 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 PIN1Q13526 163 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 GANABQ14697 944 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 LARS2Q15031 903 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 TRIP10Q15642 601 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SNCBQ16143 134 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 NTRK2Q16620 822 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 LRRC36Q1X8D7 754 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ZMAT1Q5H9K5 638 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 OR2T5Q6IEZ7 315 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 IL20RBQ6UXL0 311 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 WDR88Q6ZMY6 472 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 DEF8Q6ZN54 512 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SLC22A16Q86VW1 577 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 RPS19BP1Q86WX3 136 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 GRAMD2AQ8IUY3 354 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SLC15A4Q8N697 577 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF614Q8N883 585 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 PIK3C3Q8NEB9 887 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 OR2T29Q8NH02 315 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SLC22A8Q8TCC7 542 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 RASSF5Q8WWW0 418 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 LZICQ8WZA0 190 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 POP5Q969H6 163 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SPACA9Q96E40 222 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 TRMT61AQ96FX7 289 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 CENPNQ96H22 339 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 PRRC1Q96M27 445 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 MCHR1Q99705 422 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 NPAS1Q99742 590 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 COQ10BQ9H8M1 238 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ZDHHC11Q9H8X9 412 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 SMURF1Q9HCE7 757 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 GALNT9Q9HCQ5 603 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 UBQLN4Q9NRR5 601 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ACER3Q9NUN7 267 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF226Q9NYT6 803 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 MRTO4Q9UKD2 239 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 OAZ3Q9UMX2 235 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 CARD8Q9Y2G2 431 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 YARS2Q9Y2Z4 477 aaKnown RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 LYVE1Q9Y5Y7 322 aa4.25□□□□□ -1.73
PTPN4-206ENST00000441089 CHCHD2Q9Y6H1 151 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-206ENST00000441089 COL7A1Q02388 2944 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 A0A0G2JMM0 328 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TRBV4-1A0A0J9YWV2 114 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 A0A1B0GVC2 190 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 A0A1W2PPB8 328 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 A0A1W2PRS3 328 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 KIR3DP1A8MWS1 328 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EEF1E1-BLOC1S5C9J1V9 151 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 G3V3Y1 287 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TNFRSF11BO00300 401 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SCDO00767 359 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SOCS2O14508 198 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EI24O14681 340 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EEF1E1O43324 174 aaKnown RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 LMX1BO60663 402 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 ANGPTL1O95841 491 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms