RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C7orf57Q8NEG2 295 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 OR2T4Q8NH00 348 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 ZFP3Q96NJ6 502 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 NUDT9Q9BW91 350 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 GON7Q9BXV9 100 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 RTN4RQ9BZR6 473 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 SLC25A18Q9H1K4 315 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 MRM2Q9UI43 246 aaKnown RBP16.88■□□□□ 0.29
CLK1-205ENST00000434813 ZNF346Q9UL40 294 aaKnown RBP16.88■□□□□ 0.29
CLK1-205ENST00000434813 PCDH15Q96QU1 1955 aa16.88■□□□□ 0.29
CLK1-205ENST00000434813 A0A1W2PQD3 144 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 A6NL46 340 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 CENPBD1B2RD01 187 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 DCTN6O00399 190 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 SDC3O75056 442 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 ITGA10O75578 1167 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 UPK3AO75631 287 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 OR8G3PP0DMU2 310 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 IL12BP29460 328 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 EFNA3P52797 238 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 GPR139Q6DWJ6 353 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 C9orf40Q8IXQ3 194 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 TAAR8Q969N4 342 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 MAP6Q96JE9 813 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 MNTQ99583 582 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 DHCR7Q9UBM7 475 aaKnown RBP16.87■□□□□ 0.29
CLK1-205ENST00000434813 MRPS7Q9Y2R9 242 aaKnown RBP16.87■□□□□ 0.29
CLK1-205ENST00000434813 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 TO15178 435 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 TCRBP04435 133 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 FAM199XQ6PEV8 388 aaPredicted RBP16.87■□□□□ 0.29
CLK1-205ENST00000434813 OR1L3Q8NH93 324 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 GHITMQ9H3K2 345 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 UCKL1Q9NWZ5 548 aa16.87■□□□□ 0.29
CLK1-205ENST00000434813 IGHV1OR21-1A0A087WYE8 117 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 HCRTR2O43614 444 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 CDC40O60508 579 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLK1-205ENST00000434813 HIST1H2ABP04908 130 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 MAPK3P27361 379 aaPredicted RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 ARL4DP49703 201 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 DYRK1AQ13627 763 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 ALKBH1Q13686 389 aaKnown RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 KLF9Q13886 244 aaPredicted RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 Q499Y3 187 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 RNASE12Q5GAN4 147 aaKnown RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 HES5Q5TA89 166 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 LIPNQ5VXI9 398 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 HIST3H2AQ7L7L0 130 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 CMTM4Q8IZR5 234 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 GRPEL2Q8TAA5 225 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 HIST1H2ACQ93077 130 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 ORAI1Q96D31 301 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 ADAD1Q96M93 576 aaKnown RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 MRI1Q9BV20 369 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 TSPAN10Q9H1Z9 355 aaPredicted RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 GON4LQ3T8J9 2241 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 TRAV6A0A075B6T7 132 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 ALG1L2C9J202 215 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 H7C1C5 153 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 EIF4E2O60573 245 aaKnown RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 TSPAN2O60636 221 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 PIAS2O75928 621 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 RENP00797 406 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 BGLAPP02818 100 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 FBLP22087 321 aaKnown RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 DPP4P27487 766 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 OR1D5P58170 312 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 LCN6P62502 163 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 SNAP47Q5SQN1 464 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 EEF1A1P5Q5VTE0 462 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 OR6V1Q8N148 313 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 SLC25A38Q96DW6 304 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 NRSN2Q9GZP1 204 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 SRA1Q9HD15 236 aaKnown RBP16.86■□□□□ 0.29
CLK1-205ENST00000434813 V9GY05 133 aa16.86■□□□□ 0.29
CLK1-205ENST00000434813 TRAV36DV7A0A075B6V5 113 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 TRBV5-5A0A0J9YX44 114 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 RPP14O95059 124 aaKnown RBP16.85■□□□□ 0.29
CLK1-205ENST00000434813 ADRB1P08588 477 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 CXCR1P25024 350 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 GIFP27352 417 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 RAG2P55895 527 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 PLCXD2Q0VAA5 305 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 HLA-DQA1Q5Y7H0 255 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 SLC22A10Q63ZE4 541 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 D2HGDHQ8N465 521 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 OR5AK2Q8NH90 309 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 C1orf216Q8TAB5 229 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 DAZLQ92904 295 aaKnown RBP16.85■□□□□ 0.29
CLK1-205ENST00000434813 OR2M2Q96R28 347 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 WWTR1Q9GZV5 400 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 MED28Q9H204 178 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 AUNIPQ9H7T9 357 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 WDR76Q9H967 626 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 PLEKHA1Q9HB21 404 aa16.85■□□□□ 0.29
CLK1-205ENST00000434813 HSPB2A8KAH6 182 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 BCKDHBP21953 392 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 EGR3Q06889 387 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 FCN2Q15485 313 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 HSPB2Q16082 182 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms