RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CREB3L1Q96BA8 519 aa2.58□□□□□ -2
PMS1-209ENST00000424059 SLCO4A1Q96BD0 722 aa2.58□□□□□ -2
PMS1-209ENST00000424059 PABPC5Q96DU9 382 aaKnown RBP2.58□□□□□ -2
PMS1-209ENST00000424059 ARSGQ96EG1 525 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ELMOD3Q96FG2 381 aa2.58□□□□□ -2
PMS1-209ENST00000424059 P2RY11Q96G91 374 aa2.58□□□□□ -2
PMS1-209ENST00000424059 COQ2Q96H96 371 aa2.58□□□□□ -2
PMS1-209ENST00000424059 SFRP2Q96HF1 295 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CELF6Q96J87 481 aaKnown RBP2.58□□□□□ -2
PMS1-209ENST00000424059 ERGIC2Q96RQ1 377 aa2.58□□□□□ -2
PMS1-209ENST00000424059 VPS25Q9BRG1 176 aa2.58□□□□□ -2
PMS1-209ENST00000424059 MAP1LC3CQ9BXW4 147 aa2.58□□□□□ -2
PMS1-209ENST00000424059 RNF26Q9BY78 433 aaPredicted RBP2.58□□□□□ -2
PMS1-209ENST00000424059 REG4Q9BYZ8 158 aa2.58□□□□□ -2
PMS1-209ENST00000424059 NXF2Q9GZY0 626 aaKnown RBP2.58□□□□□ -2
PMS1-209ENST00000424059 ATG10Q9H0Y0 220 aa2.58□□□□□ -2
PMS1-209ENST00000424059 DCSTAMPQ9H295 470 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CHST8Q9H2A9 424 aa2.58□□□□□ -2
PMS1-209ENST00000424059 TMEM231Q9H6L2 316 aa2.58□□□□□ -2
PMS1-209ENST00000424059 SLC28A3Q9HAS3 691 aa2.58□□□□□ -2
PMS1-209ENST00000424059 Q9N2K0 584 aa2.58□□□□□ -2
PMS1-209ENST00000424059 C2orf42Q9NWW7 574 aa2.58□□□□□ -2
PMS1-209ENST00000424059 DDIT4Q9NX09 232 aa2.58□□□□□ -2
PMS1-209ENST00000424059 SLC2A8Q9NY64 477 aa2.58□□□□□ -2
PMS1-209ENST00000424059 COPS7AQ9UBW8 275 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ZNF223Q9UK11 482 aaPredicted RBP2.58□□□□□ -2
PMS1-209ENST00000424059 FBXW11Q9UKB1 542 aa2.58□□□□□ -2
PMS1-209ENST00000424059 RAB26Q9ULW5 256 aa2.58□□□□□ -2
PMS1-209ENST00000424059 NEU3Q9UQ49 428 aa2.58□□□□□ -2
PMS1-209ENST00000424059 TNNQ9UQP3 1299 aa2.58□□□□□ -2
PMS1-209ENST00000424059 NEDD4P46934 1319 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CNTNAP1P78357 1384 aa2.58□□□□□ -2
PMS1-209ENST00000424059 NAIPQ13075 1403 aa2.58□□□□□ -2
PMS1-209ENST00000424059 FGD6Q6ZV73 1430 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ADGRL2O95490 1459 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CACNA1IQ9P0X4 2223 aa2.58□□□□□ -2
PMS1-209ENST00000424059 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.58□□□□□ -2
PMS1-209ENST00000424059 ZCWPW2A0A1B0GU75 182 aa2.58□□□□□ -2
PMS1-209ENST00000424059 C13orf42A0A1B0GVH6 325 aa2.58□□□□□ -2
PMS1-209ENST00000424059 A0A1W2PPM1 405 aa2.58□□□□□ -2
PMS1-209ENST00000424059 RPS10-NUDT3A0A1W2PQS6 291 aa2.58□□□□□ -2
PMS1-209ENST00000424059 A0A1W2PR77 199 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CIB4A0PJX0 185 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CCDC182A6NF36 153 aa2.58□□□□□ -2
PMS1-209ENST00000424059 GAGE10A6NGK3 116 aa2.58□□□□□ -2
PMS1-209ENST00000424059 C2CD4BA6NLJ0 364 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CLDN25C9JDP6 229 aa2.58□□□□□ -2
PMS1-209ENST00000424059 IFNL4K9M1U5 179 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CLIC1O00299 241 aa2.58□□□□□ -2
PMS1-209ENST00000424059 SLC16A4O15374 487 aa2.58□□□□□ -2
PMS1-209ENST00000424059 XRCC2O43543 280 aa2.58□□□□□ -2
PMS1-209ENST00000424059 LYPLA1O75608 230 aaPredicted RBP2.58□□□□□ -2
PMS1-209ENST00000424059 RAD51DO75771 328 aa2.58□□□□□ -2
PMS1-209ENST00000424059 AP2A2O94973 939 aa2.58□□□□□ -2
PMS1-209ENST00000424059 TNFAIP8O95379 198 aa2.58□□□□□ -2
PMS1-209ENST00000424059 MT-CYBP00156 380 aaPredicted RBP2.58□□□□□ -2
PMS1-209ENST00000424059 C1QCP02747 245 aa2.58□□□□□ -2
PMS1-209ENST00000424059 TFP02787 698 aa2.58□□□□□ -2
PMS1-209ENST00000424059 GYPCP04921 128 aa2.58□□□□□ -2
PMS1-209ENST00000424059 OR8U9P0C7N5 309 aa2.58□□□□□ -2
PMS1-209ENST00000424059 FCGR2AP12318 317 aa2.58□□□□□ -2
PMS1-209ENST00000424059 IL7P13232 177 aa2.58□□□□□ -2
PMS1-209ENST00000424059 FOLR2P14207 255 aa2.58□□□□□ -2
PMS1-209ENST00000424059 HOXB2P14652 356 aa2.58□□□□□ -2
PMS1-209ENST00000424059 RBMS1P29558 406 aaKnown RBP2.58□□□□□ -2
PMS1-209ENST00000424059 ADORA1P30542 326 aa2.58□□□□□ -2
PMS1-209ENST00000424059 SDC4P31431 198 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CDKN2AP42771 156 aaKnown RBP2.58□□□□□ -2
PMS1-209ENST00000424059 BRCC3P46736 316 aa2.58□□□□□ -2
PMS1-209ENST00000424059 NPBWR2P48146 333 aa2.58□□□□□ -2
PMS1-209ENST00000424059 PPT1P50897 306 aa2.58□□□□□ -2
PMS1-209ENST00000424059 RAB2AP61019 212 aa2.58□□□□□ -2
PMS1-209ENST00000424059 UFM1P61960 85 aa2.58□□□□□ -2
PMS1-209ENST00000424059 IFITM3Q01628 133 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ZNF616Q08AN1 781 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ZP4Q12836 540 aa2.58□□□□□ -2
PMS1-209ENST00000424059 GAB1Q13480 694 aa2.58□□□□□ -2
PMS1-209ENST00000424059 GTF2H2Q13888 395 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CTTNQ14247 550 aaKnown RBP2.58□□□□□ -2
PMS1-209ENST00000424059 CYP51A1Q16850 503 aa2.58□□□□□ -2
PMS1-209ENST00000424059 QRICH1Q2TAL8 776 aa2.58□□□□□ -2
PMS1-209ENST00000424059 AWAT1Q58HT5 328 aa2.58□□□□□ -2
PMS1-209ENST00000424059 SPIN3Q5JUX0 258 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ANKRD22Q5VYY1 191 aa2.58□□□□□ -2
PMS1-209ENST00000424059 WDR25Q64LD2 544 aaPredicted RBP2.58□□□□□ -2
PMS1-209ENST00000424059 ASPHD2Q6ICH7 369 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ZNF770Q6IQ21 691 aaPredicted RBP2.58□□□□□ -2
PMS1-209ENST00000424059 RHBDD2Q6NTF9 364 aa2.58□□□□□ -2
PMS1-209ENST00000424059 GTF2H2CQ6P1K8 395 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ACSM6Q6P461 480 aa2.58□□□□□ -2
PMS1-209ENST00000424059 HAGHLQ6PII5 290 aaPredicted RBP2.58□□□□□ -2
PMS1-209ENST00000424059 FAM198BQ6UWH4 519 aa2.58□□□□□ -2
PMS1-209ENST00000424059 MOB2Q70IA6 237 aa2.58□□□□□ -2
PMS1-209ENST00000424059 FAM57BQ71RH2 274 aa2.58□□□□□ -2
PMS1-209ENST00000424059 ARPINQ7Z6K5 226 aa2.58□□□□□ -2
PMS1-209ENST00000424059 RNF130Q86XS8 419 aa2.58□□□□□ -2
PMS1-209ENST00000424059 AQP12AQ8IXF9 295 aa2.58□□□□□ -2
PMS1-209ENST00000424059 MTURNQ8N3F0 131 aa2.58□□□□□ -2
PMS1-209ENST00000424059 CSNK1A1LQ8N752 337 aa2.58□□□□□ -2
PMS1-209ENST00000424059 GDPD1Q8N9F7 314 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms