RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 RNFT2Q96EX2 444 aa12.79□□□□□ -0.36
HMGA1P1-201ENST00000415560 CRELD1Q96HD1 420 aa12.79□□□□□ -0.36
HMGA1P1-201ENST00000415560 TSPAN32Q96QS1 320 aa12.79□□□□□ -0.36
HMGA1P1-201ENST00000415560 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
HMGA1P1-201ENST00000415560 OR51V1Q9H2C8 321 aa12.79□□□□□ -0.36
HMGA1P1-201ENST00000415560 SEC14L4Q9UDX3 406 aa12.79□□□□□ -0.36
HMGA1P1-201ENST00000415560 MOKQ9UQ07 419 aa12.79□□□□□ -0.36
HMGA1P1-201ENST00000415560 TRGV5A0A0B4J1U4 118 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 FAM183AA6NL82 134 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 TFECO14948 347 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 AHCYL1O43865 530 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 RAB36O95755 333 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 STSP08842 583 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 DCKP27707 260 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 TTKP33981 857 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 STARP49675 285 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 AGFG1P52594 562 aaKnown RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 SLC25A1P53007 311 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 POU3F1Q03052 451 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 TBR1Q16650 682 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 GPAT4Q86UL3 456 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 LSRQ86X29 649 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 UBQLNLQ8IYU4 475 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 CYB561A3Q8NBI2 242 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 NPEPL1Q8NDH3 523 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 OR2T4Q8NH00 348 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 NEIL3Q8TAT5 605 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 FCGR1BQ92637 280 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 CPNE4Q96A23 557 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 ADAD1Q96M93 576 aaKnown RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 MYCBPQ99417 103 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 TEAD3Q99594 435 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 DEFB127Q9H1M4 99 aa12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 PAK1IP1Q9NWT1 392 aaPredicted RBP12.78□□□□□ -0.36
HMGA1P1-201ENST00000415560 ZNF726A6NNF4 738 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 NPIPA2E9PIF3 369 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 NPIPA3F8WFD2 350 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 AKAP8O43823 692 aaKnown RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 SYNGR4O95473 234 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 MT-ND2P03891 347 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 ITGB2P05107 769 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 TFAP2AP05549 437 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 NR2C1P13056 603 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 ZNF24P17028 368 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 JUNBP17275 347 aaPredicted RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 MYL12AP19105 171 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 CDKN2AP42771 156 aaKnown RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 EIF1AXP47813 144 aaKnown RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 BLVRAP53004 296 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 PIGFQ07326 219 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 RNLSQ5VYX0 342 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 RPUSD3Q6P087 351 aaKnown RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 DNM1P34Q6PK57 102 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 Q6ZS92 163 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 KDM8Q8N371 416 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 FNDC8Q8TC99 324 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 RORBQ92753 470 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 RBP7Q96R05 134 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 TUBA1CQ9BQE3 449 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 CDCA4Q9BXL8 241 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 MED20Q9H944 212 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 FGF20Q9NP95 211 aaPredicted RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 HAO2Q9NYQ3 351 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 TNFRSF10DQ9UBN6 386 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 DIMT1Q9UNQ2 313 aaKnown RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 ERGIC3Q9Y282 383 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 EXOGQ9Y2C4 368 aaKnown RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 RAXQ9Y2V3 346 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 EXOSC1Q9Y3B2 195 aaKnown RBP12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 DMXL1Q9Y485 3027 aa12.77□□□□□ -0.37
HMGA1P1-201ENST00000415560 PRSS37A4D1T9 235 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 OR6C68A6NDL8 312 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 CXCL13O43927 109 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 GLCEO94923 617 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 CELA3AP09093 270 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 IFNGR1P15260 489 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 CRABP1P29762 137 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 LHX2P50458 406 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 CLDN15P56746 228 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 CLDN20P56880 219 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 H3F3AP84243 136 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 POU4F3Q15319 338 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 INAQ16352 499 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 MESTQ5EB52 335 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 GTF2IRD2BQ6EKJ0 949 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 GTF2IRD2Q86UP8 949 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 GGNQ86UU5 652 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 BBS1Q8NFJ9 593 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 OR52I1Q8NGK6 324 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 OR10D3Q8NH80 312 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 ZNF519Q8TB69 540 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 ASB10Q8WXI3 467 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
HMGA1P1-201ENST00000415560 ADGRG7Q96K78 797 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms