RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LUZP2Q86TE4 346 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 SNX32Q86XE0 403 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 MISPQ8IVT2 679 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 CADM2Q8N3J6 435 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 GTPBP8Q8N3Z3 284 aaPredicted RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 CNEP1R1Q8N9A8 125 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 OR52P1PQ8NH57 321 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 OR5W2Q8NH69 310 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 OR10D3Q8NH80 312 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 OR2V1Q8NHB1 315 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 LILRB4Q8NHJ6 448 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 ZNF563Q8TA94 476 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 FNDC9Q8TBE3 224 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 ZPLD1Q8TCW7 415 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 ROBO4Q8WZ75 1007 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 DTNBP1Q96EV8 351 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 TRMT61AQ96FX7 289 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 ZNF317Q96PQ6 595 aaPredicted RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 TRNT1Q96Q11 434 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 PRR25Q96S07 402 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 SIKE1Q9BRV8 207 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 PRRG4Q9BZD6 226 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 LAT2Q9GZY6 243 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 GHITMQ9H3K2 345 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 KCNJ16Q9NPI9 418 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 SAR1AQ9NR31 198 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 CLCF1Q9UBD9 225 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 LEF1Q9UJU2 399 aaPredicted RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 LIPT1Q9Y234 373 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 ZNF443Q9Y2A4 671 aaPredicted RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 NDUFAF1Q9Y375 327 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 MRPS18CQ9Y3D5 142 aaKnown RBP4.35□□□□□ -1.71
VPS41-205ENST00000414632 AP4B1Q9Y6B7 739 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 CSMD2Q7Z408 3487 aa4.35□□□□□ -1.71
VPS41-205ENST00000414632 FREM1Q5H8C1 2179 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 AKAP9Q99996 3911 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 ANKRD17O75179 2603 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 A0A1W2PNV4 684 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 TMEM247A6NEH6 219 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 UNC119BA6NIH7 251 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 CD8B2A6NJW9 211 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 SH2D7A6NKC9 451 aaPredicted RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 HSPB2A8KAH6 182 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 EVPLLA8MZ36 301 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 DYNC1I1O14576 645 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 MRASO14807 208 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 TSPAN4O14817 238 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 EIF4E2O60573 245 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 PTP4A3O75365 173 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 AQP8O94778 261 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 SOX30O94993 753 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 SPDEFO95238 335 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 NTN1O95631 604 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 OPN1SWP03999 348 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 DBIP07108 87 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 HOXD4P09016 255 aaPredicted RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 TFPIP10646 304 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 COX6B1P14854 86 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 PGCP20142 388 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 AGAP20933 346 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 DRD4P21917 467 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 RPS4Y1P22090 263 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 ME2P23368 584 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 ZFP36P26651 326 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 CFPP27918 469 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 CEACAM8P31997 349 aaPredicted RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 PTGER4P35408 488 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 IDH2P48735 452 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 CRISP3P54108 245 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 DLX5P56178 289 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 RPS3AP61247 264 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 EEF1A1P68104 462 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 CDK6Q00534 326 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 FADDQ13158 208 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 SCARB2Q14108 478 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 ICAM4Q14773 271 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 HSPB2Q16082 182 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 CYP51A1Q16850 503 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 CTU2Q2VPK5 515 aaKnown RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 TMEM176BQ3YBM2 270 aaPredicted RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 MMEL1Q495T6 779 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 GLYR1Q49A26 553 aaPredicted RBP4.34□□□□□ -1.71
VPS41-205ENST00000414632 RUNDC3AQ59EK9 446 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 ZNF311Q5JNZ3 666 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 HBMQ6B0K9 141 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 PLEKHM3Q6ZWE6 761 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 SPATA21Q7Z572 469 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 GALNT5Q7Z7M9 940 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 SERPINA11Q86U17 422 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 COMTD1Q86VU5 262 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 MCEMP1Q8IX19 187 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 PEX5LQ8IYB4 626 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 CLIP4Q8N3C7 705 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 SMYD1Q8NB12 490 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 FAM71CQ8NEG0 241 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 OR52L2PQ8NGH6 319 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 RCN3Q96D15 328 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 RNFT2Q96EX2 444 aa4.34□□□□□ -1.71
VPS41-205ENST00000414632 ADGRG7Q96K78 797 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms