RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 MED8Q96G25 268 aa3.46□□□□□ -1.86
HMGB3P31-201ENST00000413333 ATP5SQ99766 215 aa3.46□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR51J1Q9H342 316 aa3.46□□□□□ -1.86
HMGB3P31-201ENST00000413333 SLC25A22Q9H936 323 aa3.46□□□□□ -1.86
HMGB3P31-201ENST00000413333 SIAEQ9HAT2 523 aa3.46□□□□□ -1.86
HMGB3P31-201ENST00000413333 GLRX2Q9NS18 164 aa3.46□□□□□ -1.86
HMGB3P31-201ENST00000413333 QPCTLQ9NXS2 382 aa3.46□□□□□ -1.86
HMGB3P31-201ENST00000413333 CDHR2Q9BYE9 1310 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 FANCIQ9NVI1 1328 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 IGLV3-10A0A075B6K4 115 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 A0A0G2JLM5 398 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 LRRIQ3A6PVS8 624 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 DYNC1I1O14576 645 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 AIM2O14862 343 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 HAT1O14929 419 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 RAB29O14966 203 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 EIF3HO15372 352 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 MGRN1O60291 552 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 MMP23AO75900 390 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 IGHV2-5P01817 119 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 KRT6AP02538 564 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 TCN1P20061 433 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 GABRR1P24046 479 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 BTCP35070 178 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 RORAP35398 523 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 PRPS1P60891 318 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 IL18Q14116 193 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 ARHGAP19Q14CB8 494 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 NSDHLQ15738 373 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 CHRNA6Q15825 494 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 FBXL22Q6P050 247 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 CNIH2Q6PI25 160 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 TGIF2LYQ8IUE0 185 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 OFCC1Q8IZS5 231 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 PUSL1Q8N0Z8 303 aaKnown RBP3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 MS4A15Q8N5U1 240 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 LINC00612Q8N6U2 182 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR4C5Q8NGB2 326 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 ARPC1AQ92747 370 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 RARRES2Q99969 163 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 ROGDIQ9GZN7 287 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 GEMIN7Q9H840 131 aaKnown RBP3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 IL26Q9NPH9 171 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 CALYQ9NYX4 217 aa3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 NAP1L2Q9ULW6 460 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P31-201ENST00000413333 USP47Q96K76 1375 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 TRBV11-1A0A0K0K1C0 115 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 C12orf77C9JDV5 145 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 BBOX1O75936 387 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 SUPT7LO94864 414 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 GIPP09681 153 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 CD1EP15812 388 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 CMA1P23946 247 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 CD1BP29016 333 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 TMED10P49755 219 aaKnown RBP3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 TAF6P49848 677 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 CCNHP51946 323 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 DLX1P56177 255 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 YWHAGP61981 247 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 HERPUD1Q15011 391 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 PAGE3Q5JUK9 113 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 LY6G6FQ5SQ64 297 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 SCARA5Q6ZMJ2 495 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 CCDC73Q6ZRK6 1079 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 EID2Q8N6I1 236 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 NKAPP1Q8N9T2 125 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 BPIFCQ8NFQ6 507 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR1S2Q8NGQ3 325 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 ACOT11Q8WXI4 607 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 UCN3Q969E3 161 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 PLEKHF1Q96S99 279 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 SLC29A1Q99808 456 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 SH3GL1Q99961 368 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 PLSCR3Q9NRY6 295 aa3.44□□□□□ -1.86
HMGB3P31-201ENST00000413333 MSH6P52701 1360 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 A8MUA0 341 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 TEX46H3BTG2 121 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 CLIC3O95833 236 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 TSPAN13O95857 204 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR8G3PP0DMU2 310 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 EIF2S2P20042 333 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 GTF2E2P29084 291 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 PRDX3P30048 256 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 RRM2P31350 389 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 NAA10P41227 235 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 NSG1P42857 185 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 TNNT2P45379 298 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 RGRP47804 291 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 RFX3P48380 749 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 CAV2P51636 162 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 RIPPLY3P57055 190 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 GPX6P59796 221 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 IRX3P78415 501 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 ORC2Q13416 577 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 CYTH1Q15438 398 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 KRTAP27-1Q3LI81 207 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 SOHLH1Q5JUK2 328 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 C9orf135Q5VTT2 229 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 SPINK14Q6IE38 97 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms