RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 IRGMA1A4Y4 181 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 DPPA5A6NC42 116 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 OR6C68A6NDL8 312 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 SLC22A31A6NKX4 558 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 NPIPA5E9PKD4 350 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 H0YC42 278 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 H7C1C5 153 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 EIF1AYO14602 144 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 TRAF3IP2O43734 574 aaPredicted RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 EIF1BO60739 113 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 RAMP1O60894 148 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 RAB36O95755 333 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 PDGFAP04085 211 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 GYPBP06028 91 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 CLUP10909 449 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 IFNGR1P15260 489 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ZNF708P17019 499 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ZNF24P17028 368 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 SPI1P17947 270 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 KLK2P20151 261 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 C21orf33P30042 268 aaPredicted RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 ACVR1BP36896 505 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 CDKN2AP42771 156 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 MAP2K4P45985 399 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 STARP49675 285 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 LHX2P50458 406 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 DAP3P51398 398 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 SLC25A1P53007 311 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 UCNP55089 124 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 CLDN18P56856 261 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 LCN6P62502 163 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 H3F3AP84243 136 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 HSF1Q00613 529 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 PMP22Q01453 160 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 EMX1Q04741 257 aaPredicted RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 DBPQ10586 325 aaPredicted RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 ST3GAL4Q11206 333 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 TMED1Q13445 227 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 GGTLC2Q14390 218 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 IRF3Q14653 427 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ZNF169Q14929 603 aaPredicted RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 NEDD8Q15843 81 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 NADK2Q4G0N4 442 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 KLHL12Q53G59 568 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 RNFT1Q5M7Z0 435 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ARMC4Q5T2S8 1044 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 LCN1P1Q5VSP4 162 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 FAM205BPQ63HN1 556 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 HBMQ6B0K9 141 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 GTF2IRD2BQ6EKJ0 949 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ABLIM2Q6H8Q1 611 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 B3GNT6Q6ZMB0 384 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ESPNLQ6ZVH7 1005 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ASB18Q6ZVZ8 466 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 MEPCEQ7L2J0 689 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 PXKQ7Z7A4 578 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 GTF2IRD2Q86UP8 949 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 SATL1Q86VE3 508 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 UBQLNLQ8IYU4 475 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 GHDCQ8N2G8 530 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 KDM8Q8N371 416 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 STX19Q8N4C7 294 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ZADH2Q8N4Q0 377 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 SVOPQ8N4V2 548 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ARIH2OSQ8N7S6 290 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 OR52I1Q8NGK6 324 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 OR9Q1Q8NGQ5 310 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 OR10D3Q8NH80 312 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 OR2V1Q8NHB1 315 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ASB10Q8WXI3 467 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 PTP4A1Q93096 173 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 MUL1Q969V5 352 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 OTULINQ96BN8 352 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 LGALS12Q96DT0 336 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 TMEM80Q96HE8 168 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 SNX18Q96RF0 628 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 DDOQ99489 341 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 CDCA4Q9BXL8 241 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 ZDHHC11Q9H8X9 412 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 VCX3AQ9NNX9 186 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 FGF20Q9NP95 211 aaPredicted RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 ACKR4Q9NPB9 350 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 RPRD1BQ9NQG5 326 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 MRPS18AQ9NVS2 196 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 TAS2R16Q9NYV7 291 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 PLA2G2EQ9NZK7 142 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 H2AFY2Q9P0M6 372 aaPredicted RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 WARS2Q9UGM6 360 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 NPIPA1Q9UND3 350 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 DIMT1Q9UNQ2 313 aaKnown RBP5.95□□□□□ -1.46
VPS41-204ENST00000413141 NOX1Q9Y5S8 564 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 COMMD3-BMI1R4GMX3 469 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 KIAA1549Q9HCM3 1950 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 CACNA1AO00555 2505 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 LAMA5O15230 3695 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 SPENQ96T58 3664 aaKnown RBP5.94□□□□□ -1.46
VPS41-204ENST00000413141 IGHV3-15A0A0B4J1V0 119 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 LOC102725191A0A1B0GVB3 256 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 PRSS37A4D1T9 235 aa5.94□□□□□ -1.46
VPS41-204ENST00000413141 A6NHS1 94 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms