RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF208O43345 1280 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 SUSD5O60279 629 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ZFAND5O76080 213 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 AHSA1O95433 338 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ADRB1P08588 477 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 CD63P08962 238 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 UCHL1P09936 223 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 TRAPPC2P0DI81 140 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 TRAPPC2BP0DI82 140 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 RAB3BP20337 219 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 MAPK3P27361 379 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-205ENST00000410093 APEX1P27695 318 aaKnown RBP12.31□□□□□ -0.44
LIMS1-205ENST00000410093 RBMS1P29558 406 aaKnown RBP12.31□□□□□ -0.44
LIMS1-205ENST00000410093 CDKN2AP42771 156 aaKnown RBP12.31□□□□□ -0.44
LIMS1-205ENST00000410093 LTBQ06643 244 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ZMAT1Q5H9K5 638 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 EEF1A1P5Q5VTE0 462 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 FAM205BPQ63HN1 556 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF544Q6NX49 715 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 SFXN4Q6P4A7 337 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 CNIH2Q6PI25 160 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 CPEB2Q7Z5Q1 589 aaKnown RBP12.31□□□□□ -0.44
LIMS1-205ENST00000410093 PRR22Q8IZ63 422 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 SCAIQ8N9R8 606 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF248Q8NDW4 579 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 SLC22A8Q8TCC7 542 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 RASD2Q96D21 266 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ZC3HAV1LQ96H79 300 aaKnown RBP12.31□□□□□ -0.44
LIMS1-205ENST00000410093 CCDC74BQ96LY2 380 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 KLHL15Q96M94 604 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 DEPDC7Q96QD5 511 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 GAREM1Q9H706 876 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 INIPQ9NRY2 104 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 CYSLTR2Q9NS75 346 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ATXN7L1Q9ULK2 861 aaPredicted RBP12.31□□□□□ -0.44
LIMS1-205ENST00000410093 TBC1D24Q9ULP9 559 aa12.31□□□□□ -0.44
LIMS1-205ENST00000410093 ADAMTS9Q9P2N4 1935 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 CABIN1Q9Y6J0 2220 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 IGLV3-32A0A0A0MS00 114 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 A0A1W2PQ09 198 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 A6NIZ1 184 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 NOTOA8MTQ0 251 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 E9PI62 339 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 ETV2O00321 342 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 DXOO77932 396 aaKnown RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 OR6A2O95222 327 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 CSF3P09919 207 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 SLC2A2P11168 524 aaPredicted RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 NPR2P20594 1047 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 CSRP1P21291 193 aaKnown RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 NR4A2P43354 598 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 RAP1BP61224 184 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 RAP1AP62834 184 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 ZP4Q12836 540 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF684Q5T5D7 378 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 C1orf140Q5VVS0 124 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 PWWP2BQ6NUJ5 590 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 PAPD4Q6PIY7 484 aaKnown RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 LANCL3Q6ZV70 420 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 RAB43Q86YS6 212 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 ASB17Q8WXJ9 295 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 GFM1Q96RP9 751 aaKnown RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 DCLRE1CQ96SD1 692 aaKnown RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 NRSN2Q9GZP1 204 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 WDR76Q9H967 626 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 RPRD1BQ9NQG5 326 aaKnown RBP12.3□□□□□ -0.44
LIMS1-205ENST00000410093 FSCN3Q9NQT6 498 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 C14orf119Q9NWQ9 140 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 GNG8Q9UK08 70 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF281Q9Y2X9 895 aa12.3□□□□□ -0.44
LIMS1-205ENST00000410093 ASXL3Q9C0F0 2248 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 CDC14CA4D256 554 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 FLRT2O43155 660 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 LRRTM2O43300 516 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 HPGDSO60760 199 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 KRT8P05787 483 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 PRKAR1AP10644 381 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 CEACAM1P13688 526 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 EDNRAP25101 427 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 NAA10P41227 235 aaPredicted RBP12.29□□□□□ -0.44
LIMS1-205ENST00000410093 RPL27P61353 136 aaKnown RBP12.29□□□□□ -0.44
LIMS1-205ENST00000410093 PITPNAQ00169 270 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 E2F1Q01094 437 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 BAK1Q16611 211 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 TP53I3Q53FA7 332 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 IDNKQ5T6J7 187 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 TMPRSS9Q7Z410 1059 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 AKAP14Q86UN6 197 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 CDC20BQ86Y33 519 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 ADGRG3Q86Y34 549 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 TIGD4Q8IY51 512 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 PRSS58Q8IYP2 241 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 DND1Q8IYX4 353 aaKnown RBP12.29□□□□□ -0.44
LIMS1-205ENST00000410093 Q8N402 240 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 MFSD8Q8NHS3 518 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 IFI44Q8TCB0 444 aa12.29□□□□□ -0.44
LIMS1-205ENST00000410093 HGDQ93099 445 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms