RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CDC42EP2O14613 210 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 NCR1O76036 304 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 NR2C1P13056 603 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 DRD5P21918 477 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 RANBP1P43487 201 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 MEOX1P50221 254 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 MC2RQ01718 297 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 SPOCK1Q08629 439 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 MYBPHQ13203 477 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 SRSF6Q13247 344 aaKnown RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 IL18R1Q13478 541 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 SLC25A25Q6KCM7 469 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 HEPHL1Q6MZM0 1159 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 ESPNLQ6ZVH7 1005 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 ZGRF1Q86YA3 2104 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 OR13C3Q8NGS6 347 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 TMEM163Q8TC26 289 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 AP3S1Q92572 193 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 SLC5A6Q9Y289 635 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 EXOSC1Q9Y3B2 195 aaKnown RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 CCDC168Q8NDH2 2452 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 SYT7O43581 403 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 DENRO43583 198 aaKnown RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 OR7A10O76100 309 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 SERPINA7P05543 415 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 THBS1P07996 1170 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 BMP5P22003 454 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 CRHBPP24387 322 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 CTU2Q2VPK5 515 aaKnown RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 HSD17B12Q53GQ0 312 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 ZNF691Q5VV52 312 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 METAP1DQ6UB28 335 aaPredicted RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 UGT2A3Q6UWM9 527 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 MEPCEQ7L2J0 689 aaKnown RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 TAAR8Q969N4 342 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 ISOC1Q96CN7 298 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 COX4I2Q96KJ9 171 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 C7orf34Q96L11 122 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 KLHL15Q96M94 604 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 CDH20Q9HBT6 801 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 POLE4Q9NR33 117 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 KLF13Q9Y2Y9 288 aaPredicted RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 PCDHGB1Q9Y5G3 927 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 QDPRP09417 244 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 CRABP1P29762 137 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 RGS19P49795 217 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 HSF1Q00613 529 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 ECH1Q13011 328 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 AIMP2Q13155 320 aaKnown RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 CBLBQ13191 982 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 DCTN2Q13561 401 aaKnown RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 RASSF6Q6ZTQ3 369 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 KANSL1Q7Z3B3 1105 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 CAMKMTQ7Z624 323 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 CRLF2Q9HC73 371 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 C14orf119Q9NWQ9 140 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 FAM240BA0A1B0GVZ2 78 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 PRAMEF27A3QJZ7 478 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 MEIS3P1A6NDR6 274 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 PRR33A8MZF0 331 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 EIF4E2O60573 245 aaKnown RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 SNRNP200O75643 2136 aaKnown RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 B4GALT1P15291 398 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 IDH3GP51553 393 aaPredicted RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 SLC35A1P78382 337 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 FNDC9Q8TBE3 224 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 FCGR1BQ92637 280 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 FGF11Q92914 225 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 C3orf49Q96BT1 292 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 SPACA5Q96QH8 159 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 RNF167Q9H6Y7 350 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 EMC9Q9Y3B6 208 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 TMEM14AQ9Y6G1 99 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 IFNA6P05013 189 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 TMEM225BP0DP42 221 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 RORCP51449 518 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 SHBQ15464 509 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 ATAD3CQ5T2N8 411 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 CDCP2Q5VXM1 449 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 KDM4DQ6B0I6 523 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 TIPARPQ7Z3E1 657 aaKnown RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 OR52N5Q8NH56 324 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 LOXL4Q96JB6 756 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 ZNF582Q96NG8 517 aaPredicted RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 OLAHQ9NV23 265 aa10.34□□□□□ -0.75
SNX13-202ENST00000409604 DNAJB12Q9NXW2 375 aaKnown RBP10.34□□□□□ -0.75
SNX13-202ENST00000409604 FANCMQ8IYD8 2048 aa10.33□□□□□ -0.76
SNX13-202ENST00000409604 HTR2AP28223 471 aa10.33□□□□□ -0.76
SNX13-202ENST00000409604 EIF1P41567 113 aaKnown RBP10.33□□□□□ -0.76
SNX13-202ENST00000409604 ILKQ13418 452 aa10.33□□□□□ -0.76
SNX13-202ENST00000409604 MIB2Q96AX9 1013 aa10.33□□□□□ -0.76
SNX13-202ENST00000409604 CRELD1Q96HD1 420 aa10.33□□□□□ -0.76
SNX13-202ENST00000409604 SPSB2Q99619 263 aa10.33□□□□□ -0.76
SNX13-202ENST00000409604 MEX3AA1L020 520 aaKnown RBP10.33□□□□□ -0.76
SNX13-202ENST00000409604 RAD51DO75771 328 aa10.33□□□□□ -0.76
SNX13-202ENST00000409604 ARL6IP5O75915 188 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms