RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 POU3F1Q03052 451 aaPredicted RBP13.04□□□□□ -0.32
SUMO1-207ENST00000409498 CCNIQ14094 377 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 TAF11Q15544 211 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 EXOC3L2Q2M3D2 409 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 ZBED5Q49AG3 693 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 C1QTNF12Q5T7M4 302 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 ZNF770Q6IQ21 691 aaPredicted RBP13.04□□□□□ -0.32
SUMO1-207ENST00000409498 NIPAL3Q6P499 406 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 MEX3BQ6ZN04 569 aaKnown RBP13.04□□□□□ -0.32
SUMO1-207ENST00000409498 SLC35D2Q76EJ3 337 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 OAFQ86UD1 273 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 OR6X1Q8NH79 312 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 FAM46AQ96IP4 442 aaKnown RBP13.04□□□□□ -0.32
SUMO1-207ENST00000409498 TXNDC15Q96J42 360 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 DACH2Q96NX9 599 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 OR2M2Q96R28 347 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 REEP1Q9H902 201 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 INIPQ9NRY2 104 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 ARMC1Q9NVT9 282 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 KCNN3Q9UGI6 736 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 SIGLEC7Q9Y286 467 aa13.04□□□□□ -0.32
SUMO1-207ENST00000409498 SLC35F4A4IF30 521 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 TUBAL3A6NHL2 446 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 C11orf98E9PRG8 122 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
SUMO1-207ENST00000409498 SLC43A1O75387 559 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 CIB2O75838 187 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 CST1P01037 141 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 SAGP10523 405 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-207ENST00000409498 COX6B1P14854 86 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 IFNGR1P15260 489 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 FPR3P25089 353 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 GPR4P46093 362 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 GSSP48637 474 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 ACTR3P61158 418 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 LAPTM4AQ15012 233 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 STK11Q15831 433 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 MICAQ29983 383 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 ALG10Q5BKT4 473 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 PGBD2Q6P3X8 592 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.03□□□□□ -0.32
SUMO1-207ENST00000409498 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-207ENST00000409498 CXorf67Q86X51 503 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-207ENST00000409498 C20orf196Q8IYI0 205 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 ZNF433Q8N7K0 673 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-207ENST00000409498 STEAP2Q8NFT2 490 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 MOSPD2Q8NHP6 518 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 FAM222BQ8WU58 562 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 TNFRSF13CQ96RJ3 184 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 GPX7Q96SL4 187 aaPredicted RBP13.03□□□□□ -0.32
SUMO1-207ENST00000409498 GPA33Q99795 319 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 MCCC2Q9HCC0 563 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 ASB6Q9NWX5 421 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 MED29Q9NX70 200 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 VNN3Q9NY84 501 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 TAS2R16Q9NYV7 291 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 ALPK2Q86TB3 2170 aa13.03□□□□□ -0.32
SUMO1-207ENST00000409498 FAM221AA4D161 298 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 ARRDC5A6NEK1 342 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 CLOCKO15516 846 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 OR10H3O60404 316 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 UPK3AO75631 287 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 GOSR1O95249 250 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 ITGA5P08648 1049 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 EPXP11678 715 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 ZNF26P17031 533 aaPredicted RBP13.02□□□□□ -0.33
SUMO1-207ENST00000409498 MPGP29372 298 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 KIR2DL3P43628 341 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 IL1RL1Q01638 556 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 TSPAN31Q12999 210 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 DAZAP2Q15038 168 aaPredicted RBP13.02□□□□□ -0.33
SUMO1-207ENST00000409498 HIST3H3Q16695 136 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 ARMC4Q5T2S8 1044 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 SSX8Q7RTT4 187 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 WDFY1Q8IWB7 410 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 C1orf162Q8NEQ5 155 aaPredicted RBP13.02□□□□□ -0.33
SUMO1-207ENST00000409498 OR13C2Q8NGS9 318 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 OR51A7Q8NH64 312 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 GNPDA2Q8TDQ7 276 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 C14orf79Q96F83 325 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 SLC25A44Q96H78 314 aaPredicted RBP13.02□□□□□ -0.33
SUMO1-207ENST00000409498 MRPL13Q9BYD1 178 aaKnown RBP13.02□□□□□ -0.33
SUMO1-207ENST00000409498 TXNIPQ9H3M7 391 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 STX18Q9P2W9 335 aaKnown RBP13.02□□□□□ -0.33
SUMO1-207ENST00000409498 UPB1Q9UBR1 384 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 DNAJB9Q9UBS3 223 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 NDRG3Q9UGV2 375 aa13.02□□□□□ -0.33
SUMO1-207ENST00000409498 SAMHD1Q9Y3Z3 626 aaKnown RBP13.02□□□□□ -0.33
SUMO1-207ENST00000409498 TRAV27A0A087WT01 109 aa13.01□□□□□ -0.33
SUMO1-207ENST00000409498 A0A1W2PRG6 482 aa13.01□□□□□ -0.33
SUMO1-207ENST00000409498 ZNF726A6NNF4 738 aa13.01□□□□□ -0.33
SUMO1-207ENST00000409498 CCNB2O95067 398 aa13.01□□□□□ -0.33
SUMO1-207ENST00000409498 BCL10O95999 233 aa13.01□□□□□ -0.33
SUMO1-207ENST00000409498 IGHV3-9P01782 118 aa13.01□□□□□ -0.33
SUMO1-207ENST00000409498 F13BP05160 661 aa13.01□□□□□ -0.33
SUMO1-207ENST00000409498 DNAJA1P31689 397 aaKnown RBP13.01□□□□□ -0.33
SUMO1-207ENST00000409498 DAP3P51398 398 aaKnown RBP13.01□□□□□ -0.33
SUMO1-207ENST00000409498 ZNF133P52736 654 aaPredicted RBP13.01□□□□□ -0.33
SUMO1-207ENST00000409498 BIDP55957 195 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms