RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TSPAN10Q9H1Z9 355 aaPredicted RBP16.76■□□□□ 0.27
COL18A1-204ENST00000400337 A0A1B0GTL3 188 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 TNFRSF10AO00220 468 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 ST6GAL1P15907 406 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 SSTR2P30874 369 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 EIF1P41567 113 aaKnown RBP16.76■□□□□ 0.27
COL18A1-204ENST00000400337 ALKBH1Q13686 389 aaKnown RBP16.76■□□□□ 0.27
COL18A1-204ENST00000400337 NKAIN1Q4KMZ8 207 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 KDM8Q8N371 416 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 OR7G2Q8NG99 324 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 ARL11Q969Q4 196 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 IKZF5Q9H5V7 419 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 CALHM2Q9HA72 323 aa16.76■□□□□ 0.27
COL18A1-204ENST00000400337 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 OR2A25A4D2G3 310 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 PRAMEF25A6NGN4 478 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 TNFSF12O43508 249 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF585AQ6P3V2 769 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 OR2M2Q96R28 347 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 RAB9BQ9NP90 201 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 A0A087WUU8 490 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 DPM1O60762 260 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 PLGLAQ15195 96 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 STEAP3Q658P3 488 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 PSMF1Q92530 271 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF419Q96HQ0 510 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-204ENST00000400337 NTNG1Q9Y2I2 539 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 TIMM8BQ9Y5J9 83 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-204ENST00000400337 MYO5AQ9Y4I1 1855 aaKnown RBP16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ETHE1O95571 254 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 SLC9A3R2Q15599 337 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ARHGAP11BQ3KRB8 267 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 AADACL4Q5VUY2 407 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ESX1Q8N693 406 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 OR52N1Q8NH53 320 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 CCDC74AQ96AQ1 378 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 MICU1Q9BPX6 476 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 SMIM3Q9BZL3 60 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 CBX7O95931 251 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ENPP1P22413 925 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ADPRMQ3LIE5 342 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF684Q5T5D7 378 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 OR56B1Q8NGI3 324 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 BAHD1Q8TBE0 780 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ZFAND1Q8TCF1 268 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 ALDH3B2P48448 385 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 NPSR1Q6W5P4 371 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 EGFL6Q8IUX8 553 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 OR56B4Q8NH76 319 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 UNKLQ9H9P5 680 aaKnown RBP16.75■□□□□ 0.27
COL18A1-204ENST00000400337 COQ3Q9NZJ6 369 aa16.75■□□□□ 0.27
COL18A1-204ENST00000400337 EIF1BO60739 113 aaKnown RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 IGFBP1P08833 259 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 MZT1Q08AG7 82 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 SYT14P1Q58G82 188 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF679Q8IYX0 411 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 SLC7A5P1Q8MH63 180 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 UBE2ZQ9H832 354 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 MPPED1O15442 326 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 GLCEO94923 617 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 EVI2BP34910 448 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 HNRNPFP52597 415 aaKnown RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 RNF128Q8TEB7 428 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 RAB3CQ96E17 227 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 TP53TG5Q9Y2B4 290 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 OTOL1A6NHN0 477 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 GABREP78334 506 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 FGF14Q92915 247 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 CDCP1Q9H5V8 836 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 MRPS28Q9Y2Q9 187 aaKnown RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 TMEM184BQ9Y519 407 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 ARL3P36405 182 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 GPR176Q14439 515 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 IDO2Q6ZQW0 420 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 GRINAQ7Z429 371 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 MIB2Q96AX9 1013 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 SLCO4A1Q96BD0 722 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 CNTNAP3BQ96NU0 1288 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF286AQ9HBT8 521 aa16.74■□□□□ 0.27
COL18A1-204ENST00000400337 RANGRFQ9HD47 186 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 MAP1BP46821 2468 aaKnown RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-204ENST00000400337 TRDV1A0A1B0GX56 115 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 PRAMEF27A3QJZ7 478 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 FCMRO60667 390 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 ADAM23O75077 832 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 TSPAN12O95859 305 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 TK1P04183 234 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 PRKACBP22694 351 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 GLYR1Q49A26 553 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 PRAMEF9Q5VWM5 478 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 GPR155Q7Z3F1 870 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF681Q96N22 645 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 TWSG1Q9GZX9 223 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 TAS2R46P59540 309 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 RPS18P62269 152 aaKnown RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 RBMS2Q15434 407 aaKnown RBP16.73■□□□□ 0.27
COL18A1-204ENST00000400337 SLC36A2Q495M3 483 aa16.73■□□□□ 0.27
COL18A1-204ENST00000400337 YIF1BQ5BJH7 314 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms