RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 VSTM2BA6NLU5 285 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 FZD7O75084 574 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 NSA2O95478 260 aaKnown RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 MBP02144 154 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 ATP1B1P05026 303 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 APEHP13798 732 aaKnown RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 OTX2P32243 289 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 FNTBP49356 437 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 ZNF770Q6IQ21 691 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 TIPARPQ7Z3E1 657 aaKnown RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 SMRP1Q8NCR6 262 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 LGALS14Q8TCE9 139 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 ADAMTS18Q8TE60 1221 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 INTS14Q96SY0 518 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 TSPAN10Q9H1Z9 355 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 EIF2B1Q14232 305 aaKnown RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 EEF1A1P5Q5VTE0 462 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 FAM205BPQ63HN1 556 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 PAPD4Q6PIY7 484 aaKnown RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 CLDN22Q8N7P3 220 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 KIAA1143Q96AT1 154 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 PRRG4Q9BZD6 226 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 SLC25A19Q9HC21 320 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 DHDHQ9UQ10 334 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 SIGLEC7Q9Y286 467 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 RNF215Q9Y6U7 377 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 SHISA8B8ZZ34 492 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 SUSD5O60279 629 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 STOMP27105 288 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 FAUP35544 74 aaKnown RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 CLRN1P58418 232 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 AP3S2P59780 193 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 PSG6Q00889 435 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 LRRC69Q6ZNQ3 347 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 CEP76Q8TAP6 659 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 CCDC74AQ96AQ1 378 aa12.35□□□□□ -0.43
SIRPA-203ENST00000400068 ZMAT3Q9HA38 289 aaKnown RBP12.35□□□□□ -0.43
SIRPA-203ENST00000400068 IGHV1OR15-9A0A0B4J2B8 117 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 H7C2Y5 167 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 GTF2F2P13984 249 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 ZNF20P17024 532 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 CCR5P51681 352 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 LIMK1P53667 647 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 ATXN7L3Q14CW9 347 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 KCTD18Q6PI47 426 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 FCAMRQ8WWV6 532 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 ANKRD9Q96BM1 317 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 GALNT9Q9HCQ5 603 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 A0A087WV62 115 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 METTL12A8MUP2 240 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 FAM53BQ14153 422 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 WDR88Q6ZMY6 472 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 Q7L0L9 218 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 KANSL1Q7Z3B3 1105 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 OR52N1Q8NH53 320 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 ZNF431Q8TF32 576 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 KLHL15Q96M94 604 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 LMF2Q9BU23 707 aaKnown RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 MENTQ9BUN1 341 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 BARHL1Q9BZE3 327 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 PTRH2Q9Y3E5 179 aaKnown RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 MDC1Q14676 2089 aaKnown RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 A0A1B0GTH9 108 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 CYR61O00622 381 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 IMPA2O14732 288 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 CD14P08571 375 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 UCHL1P09936 223 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 LIPCP11150 499 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 RIDAP52758 137 aaKnown RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 TSPAN5P62079 268 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 SLC25A35Q3KQZ1 300 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 KLHL26Q53HC5 615 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 ATAD3CQ5T2N8 411 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 C17orf47Q8NEP4 570 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 TMEM106AQ96A25 262 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 ZNF486Q96H40 463 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-203ENST00000400068 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 FLRT3Q9NZU0 649 aa12.34□□□□□ -0.43
SIRPA-203ENST00000400068 MTCL1Q9Y4B5 1905 aaKnown RBP12.33□□□□□ -0.43
SIRPA-203ENST00000400068 POM121CA8CG34 1229 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 TMEM229AB2RXF0 380 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 FOLR1P15328 257 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 CCNOP22674 350 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 ZNF81P51508 661 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 CCR6P51684 374 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 GALEQ14376 348 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 SGCBQ16585 318 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 LRRC37A5PQ49AS3 106 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 MANEAQ5SRI9 462 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 QSOX2Q6ZRP7 698 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 SYT13Q7L8C5 426 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 STT3BQ8TCJ2 826 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 PCNPQ8WW12 178 aaKnown RBP12.33□□□□□ -0.44
SIRPA-203ENST00000400068 ACOT12Q8WYK0 555 aa12.33□□□□□ -0.44
SIRPA-203ENST00000400068 C10orf90Q96M02 699 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms