RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZNF74Q16587 644 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 PRTGQ2VWP7 1150 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 ELOA3BQ3SY89 546 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 FAM220AQ7Z4H9 259 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 ZNF595Q8IYB9 648 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 FRMD1Q8N878 549 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 C19orf47Q8N9M1 422 aaKnown RBP23.29■■□□□ 1.32
COL13A1-203ENST00000398969 LRRC75AQ8NAA5 344 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 ELOA3Q8NG57 546 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 HAVCR1Q96D42 359 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 GAS2L1Q99501 681 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-203ENST00000398969 CDCP1Q9H5V8 836 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 TCF7L1Q9HCS4 588 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 OR5K4A6NMS3 321 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 CD14P08571 375 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 ADRA2CP18825 462 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 CDK2P24941 298 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 RAD52P43351 418 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 EPHA4P54764 986 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 MRPS10P82664 201 aaKnown RBP23.28■■□□□ 1.32
COL13A1-203ENST00000398969 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.28■■□□□ 1.32
COL13A1-203ENST00000398969 KLHL26Q53HC5 615 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 ARMC6Q6NXE6 501 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 KCTD20Q7Z5Y7 419 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 OR6V1Q8N148 313 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 FTMTQ8N4E7 242 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 GATSQ8NAP1 163 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 LSM14AQ8ND56 463 aaKnown RBP23.28■■□□□ 1.32
COL13A1-203ENST00000398969 OR2T4Q8NH00 348 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 MOGAT1Q96PD6 335 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 RBP7Q96R05 134 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 NOX3Q9HBY0 568 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 HS3ST3A1Q9Y663 406 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 FKBP7Q9Y680 259 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 FUT7Q11130 342 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 ALKBH1Q13686 389 aaKnown RBP23.28■■□□□ 1.32
COL13A1-203ENST00000398969 CLLU1Q5K131 121 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 LIPNQ5VXI9 398 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 ZNF440Q8IYI8 595 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 C10orf53Q8N6V4 93 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 OR5AK2Q8NH90 309 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 CEP76Q8TAP6 659 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 MIB2Q96AX9 1013 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 ADAD1Q96M93 576 aaKnown RBP23.28■■□□□ 1.32
COL13A1-203ENST00000398969 SEC22CQ9BRL7 303 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 SLITRK2Q9H156 845 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 FRRS1LQ9P0K9 344 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 UBQLN2Q9UHD9 624 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 FBXL3Q9UKT7 428 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 MOKQ9UQ07 419 aa23.28■■□□□ 1.32
COL13A1-203ENST00000398969 MAOAP21397 527 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 ART1P52961 327 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 HHEXQ03014 270 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 WBP2NLQ6ICG8 309 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 SLC25A25Q6KCM7 469 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 GLDNQ6ZMI3 551 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-203ENST00000398969 TAF8Q7Z7C8 310 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 ATG4DQ86TL0 474 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-203ENST00000398969 MSANTD3Q96H12 275 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 LMF1Q96S06 567 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 DHRS9Q9BPW9 319 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 PHF7Q9BWX1 381 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-203ENST00000398969 TAS2R10Q9NYW0 307 aa23.27■■□□□ 1.32
COL13A1-203ENST00000398969 PDGFAP04085 211 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 APEHP13798 732 aaKnown RBP23.26■■□□□ 1.31
COL13A1-203ENST00000398969 MAPK3P27361 379 aaPredicted RBP23.26■■□□□ 1.31
COL13A1-203ENST00000398969 SOX2P48431 317 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 ALG10Q5BKT4 473 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 FAAP20Q6NZ36 180 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 Q6ZS52 159 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 LIPHQ8WWY8 451 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 CCNL2Q96S94 520 aaPredicted RBP23.26■■□□□ 1.31
COL13A1-203ENST00000398969 FKRPQ9H9S5 495 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 ETV7Q9Y603 341 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 OIP5O43482 229 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 SEMA4FO95754 770 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 ABHD16AO95870 558 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 CFDP00746 253 aaPredicted RBP23.26■■□□□ 1.31
COL13A1-203ENST00000398969 IFNA16P05015 189 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 PNMTP11086 282 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 SDHAP31040 664 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 DCTDP32321 178 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 MNDAP41218 407 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 RABIFP47224 123 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 CTXN1P60606 82 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 CD226Q15762 336 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 LINC00303Q3SY05 128 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 LRRTM1Q86UE6 522 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 DND1Q8IYX4 353 aaKnown RBP23.26■■□□□ 1.31
COL13A1-203ENST00000398969 ZNF615Q8N8J6 731 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 CHIAQ9BZP6 476 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 SLC6A5Q9Y345 797 aa23.26■■□□□ 1.31
COL13A1-203ENST00000398969 TRBV5-5A0A0J9YX44 114 aa23.25■■□□□ 1.31
COL13A1-203ENST00000398969 ACOT7O00154 380 aa23.25■■□□□ 1.31
COL13A1-203ENST00000398969 CLDN4O14493 209 aa23.25■■□□□ 1.31
COL13A1-203ENST00000398969 PRKNO60260 465 aaPredicted RBP23.25■■□□□ 1.31
COL13A1-203ENST00000398969 IGF2P01344 180 aa23.25■■□□□ 1.31
COL13A1-203ENST00000398969 TAS2R20P59543 309 aa23.25■■□□□ 1.31
COL13A1-203ENST00000398969 EIF2B5Q13144 721 aaKnown RBP23.25■■□□□ 1.31
COL13A1-203ENST00000398969 GRK1Q15835 563 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms