RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 RUNX2Q13950 521 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 RPL13AP3Q6NVV1 102 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 APOOLQ6UXV4 268 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 SDR9C7Q8NEX9 313 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 PELI1Q96FA3 418 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 ZNF285Q96NJ3 590 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 PDCD1LG2Q9BQ51 273 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 GINS4Q9BRT9 223 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 MTIF3Q9H2K0 278 aaKnown RBP14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 ZFP57Q9NU63 452 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 TRAV1-2A0A0B4J238 106 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 UBE2QL1A1L167 161 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 LDB3O75112 727 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 CPMP14384 443 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 SPI1P17947 270 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 NT5EP21589 574 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 PTGFRP43088 359 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 ACTC1P68032 377 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 ACTA1P68133 377 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 SKA3Q8IX90 412 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 TEX19Q8NA77 164 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 OR52E2Q8NGJ4 325 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 OR4K13Q8NH42 304 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 PTCHD1Q96NR3 888 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 OR1F2PQ96R84 312 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 MIOXQ9UGB7 285 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 TRBV23OR9-2A0A075B6M9 112 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 RAB19A4D1S5 217 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 F5H5P2 479 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 P2RX6O15547 441 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 PSMB10P40306 273 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 FNTBP49356 437 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 PSMD4P55036 377 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 PLAURQ03405 335 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 EXOSC7Q15024 291 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 CDK5R1Q15078 307 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 PDGFRLQ15198 375 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 CST6Q15828 149 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 GUCA2BQ16661 112 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 MANEAQ5SRI9 462 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 CMTM4Q8IZR5 234 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 ZFP82Q8N141 532 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 THAP6Q8TBB0 222 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 HMGB4Q8WW32 186 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 LCN9Q8WX39 176 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 SLC25A18Q9H1K4 315 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 SFXN1Q9H9B4 322 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 TRPV4Q9HBA0 871 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 OBP2AQ9NY56 170 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 WSB2Q9NYS7 404 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 GNG8Q9UK08 70 aa14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 RANBP2P49792 3224 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-201ENST00000397901 GXYLT2A0PJZ3 443 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 GPR89AB7ZAQ6 455 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 KHDRBS3O75525 346 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 ARL6IP5O75915 188 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 IGHV2-70P01814 119 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 GPR89BP0CG08 455 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 ZNF35P13682 527 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 RPS4Y1P22090 263 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 PTAFRP25105 342 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 MAT2AP31153 395 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 OLFML2AQ68BL7 652 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 USP53Q70EK8 1073 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 ZAR1Q86SH2 424 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 SMIM19Q96E16 107 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 PBX4Q9BYU1 374 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 DCAF16Q9NXF7 216 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 TRBV2A0A0J9YWF9 115 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 EIF4E2O60573 245 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 EML2O95834 649 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 ATP1B1P05026 303 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 EDNRAP25101 427 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 MAGEB1P43366 347 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 H2BFSP57053 126 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 RPS11P62280 158 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 SNRPEP62304 92 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 IL10RAQ13651 578 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 TANGO2Q6ICL3 276 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 VITQ6UXI7 678 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 EID2Q8N6I1 236 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 OR5M1Q8NGP8 315 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 RXFP4Q8TDU9 374 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 TCEAL7Q9BRU2 100 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 IL21RQ9HBE5 538 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 TMEM27Q9HBJ8 222 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 C14orf105Q9NVL8 296 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 GDE1Q9NZC3 331 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 THAP10Q9P2Z0 257 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 SLC22A7Q9Y694 548 aa14.61□□□□□ -0.07
CHMP1A-201ENST00000397901 OR6C74A6NCV1 312 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 EFCAB7A8K855 629 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 GABARAPH6UMI1 98 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 ZNF749O43361 778 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 NGFRP08138 427 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 SLC35G6P0C7Q6 338 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 RAB5BP61020 215 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 UBE2IP63279 158 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 ECH1Q13011 328 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 LINC00303Q3SY05 128 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms