RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 TEAD3Q99594 435 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 CDCA4Q9BXL8 241 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 AMBNQ9NP70 447 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 FGF20Q9NP95 211 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-209ENST00000397036 VSX1Q9NZR4 365 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-209ENST00000397036 MOKQ9UQ07 419 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 EXOGQ9Y2C4 368 aaKnown RBP12.18□□□□□ -0.46
MCF2L-209ENST00000397036 RAXQ9Y2V3 346 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 SNX5Q9Y5X3 404 aa12.18□□□□□ -0.46
MCF2L-209ENST00000397036 FREM3P0C091 2139 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 ANKRD11Q6UB99 2663 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CENPBD1B2RD01 187 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 BCL10O95999 233 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 OPN1LWP04000 364 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CPN1P15169 458 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF708P17019 499 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 RFC3P40938 356 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CDKN2AP42771 156 aaKnown RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 ALDH3B2P48448 385 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CD97P48960 835 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CENPAP49450 140 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 NUDT6P53370 316 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 MLLT10P55197 1068 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CLDN15P56746 228 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CLDN20P56880 219 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 ST3GAL4Q11206 333 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 KRR1Q13601 381 aaKnown RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 RNFT1Q5M7Z0 435 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 HBMQ6B0K9 141 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 VASNQ6EMK4 673 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 TMEM225Q6GV28 225 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 BCDIN3DQ7Z5W3 292 aaKnown RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 JAZF1Q86VZ6 243 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 EXD3Q8N9H8 876 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 C9orf43Q8TAL5 461 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 ABTB1Q969K4 478 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 JAM3Q9BX67 310 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 VCX3AQ9NNX9 186 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 ERVK-18Q9QC07 812 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 TUBD1Q9UJT1 453 aa12.17□□□□□ -0.46
MCF2L-209ENST00000397036 DIMT1Q9UNQ2 313 aaKnown RBP12.17□□□□□ -0.46
MCF2L-209ENST00000397036 TRGV5A0A0B4J1U4 118 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 PRSS37A4D1T9 235 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 OR6C68A6NDL8 312 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 FAM183AA6NL82 134 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 C11orf98E9PRG8 122 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 XKRYO14609 159 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TNFSF11O14788 317 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 FADS2O95864 444 aaKnown RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 RENP00797 406 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 CELA3AP09093 270 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 ATP6V1B1P15313 513 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF24P17028 368 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 ENPP1P22413 925 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 STARP49675 285 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 CLDN18P56856 261 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 POU4F2Q12837 409 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 IRF3Q14653 427 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 MESTQ5EB52 335 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 AHSA2Q719I0 299 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 SLC35D2Q76EJ3 337 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TRILQ7L0X0 811 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 UEVLDQ8IX04 471 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 STX19Q8N4C7 294 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 MEIOBQ8N635 442 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 RBMXL3Q8N7X1 1067 aaKnown RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 SGCDQ92629 289 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 RASD2Q96D21 266 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 LGALS12Q96DT0 336 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 DNAJA3Q96EY1 480 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TMEM80Q96HE8 168 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 NMNAT3Q96T66 252 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TUBA1CQ9BQE3 449 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TSPAN10Q9H1Z9 355 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 B3GNT3Q9Y2A9 372 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 FKBP7Q9Y680 259 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 CELSR3Q9NYQ7 3312 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 MAP1BP46821 2468 aaKnown RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TMEM8BA6NDV4 472 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 NPIPA5E9PKD4 350 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 J3QRE1 110 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TAF4O00268 1085 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 EIF1AYO14602 144 aaKnown RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TRAF3IP2O43734 574 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 STSP08842 583 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 IFNGR1P15260 489 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF43P17038 809 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 PCMT1P22061 227 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 TTKP33981 857 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 ACVR1BP36896 505 aa12.16□□□□□ -0.46
MCF2L-209ENST00000397036 SUCLG1P53597 346 aaKnown RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 RPS3AP61247 264 aaKnown RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 EMX1Q04741 257 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-209ENST00000397036 GGTLC2Q14390 218 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms