RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PAQR6Q6TCH4 344 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 OR56B4Q8NH76 319 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 NECAB3Q96P71 396 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ARHGAP9Q9BRR9 750 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SORBS1Q9BX66 1292 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PLEK2Q9NYT0 353 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CES1P1Q9UKY3 287 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RASD1Q9Y272 281 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PTPRSQ13332 1948 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 A8MUA0 341 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TFECO14948 347 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ATG12O94817 140 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RLN2P04090 185 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 MAP2K4P45985 399 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A1P53007 311 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RNF4P78317 190 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RAE1P78406 368 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 MAB21L1Q13394 359 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 MAML2Q8IZL2 1156 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM203Q969S6 136 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RBFOX1Q9NWB1 397 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 QPCTLQ9NXS2 382 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ETAA1Q9NY74 926 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 DCNP07585 359 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 YES1P07947 543 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PRSS3P35030 304 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 OR1D5P58170 312 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RPL27P61353 136 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CTU2Q2VPK5 515 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 NLGN4XQ8N0W4 816 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 NLGN4YQ8NFZ3 816 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PMEPA1Q969W9 287 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SARAFQ96BY9 339 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 DOK1Q99704 481 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TMED9Q9BVK6 235 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ULBP2Q9BZM5 246 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ENKD1Q9H0I2 346 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 KCMF1Q9P0J7 381 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 GMPR2Q9P2T1 348 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SIGLEC7Q9Y286 467 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RRP8O43159 456 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ITGA5P08648 1049 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 GKN3PP0CG01 181 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PSKH1P11801 424 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 FGF5P12034 268 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 EMDP50402 254 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RAC3P60763 192 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ACTBL2Q562R1 376 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 C1QTNF12Q5T7M4 302 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 C1orf189Q5VU69 101 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 FAM180BQ6P0A1 224 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 LEG1Q6P5S2 330 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 NANOGP1Q8N7R0 232 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SORCS2Q96PQ0 1159 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TAAR9Q96RI9 348 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 HCAR1Q9BXC0 346 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF221Q9UK13 617 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 LOC105369274A0A096LPK9 316 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 LOC102723532A0A0G2JNH3 316 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PPM1DO15297 605 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 HCKP08631 526 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 HOXB9P17482 250 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ARHGDIBP52566 201 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 DSCR4P56555 118 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ARG2P78540 354 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CLVS2Q5SYC1 327 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CCNJQ5T5M9 372 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 BCL2L15Q5TBC7 163 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 LRRC69Q6ZNQ3 347 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 B3GNT8Q7Z7M8 397 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 OR4N4Q8N0Y3 316 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 OR6M1Q8NGM8 313 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 OR1J2Q8NGS2 313 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PATE1Q8WXA2 126 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 MED18Q9BUE0 208 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SYT4Q9H2B2 425 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SRA1Q9HD15 236 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 IER3IP1Q9Y5U9 82 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 V9GY05 133 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TMED7-TICAM2A0A0A6YYA0 188 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 METTL15A6NJ78 407 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 OTX2P32243 289 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 DCTDP32321 178 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RAG2P55895 527 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 AIMP2Q13155 320 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ACSM3Q53FZ2 586 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 C6orf15Q6UXA7 325 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 NDUFAF7Q7L592 441 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF554Q86TJ5 538 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TMPRSS12Q86WS5 348 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SMPDL3BQ92485 455 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SCPEP1Q9HB40 452 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SLC52A3Q9NQ40 469 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 IFT46Q9NQC8 304 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 A4GNTQ9UNA3 340 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SORL1Q92673 2214 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 DSPPQ9NZW4 1301 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 IGHV5-51A0A0C4DH38 117 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM269A0A1B0GVZ9 245 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms