RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 FOXG1P55316 489 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 LSM11P83369 360 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 STK11Q15831 433 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 C9orf135Q5VTT2 229 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 PGM2L1Q6PCE3 622 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 PODNL1Q6PEZ8 512 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 SLC35D2Q76EJ3 337 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 PIWIL3Q7Z3Z3 882 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 WFDC8Q8IUA0 241 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 GPR137CQ8N3F9 429 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 MUCL1Q96DR8 90 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 DHRS1Q96LJ7 313 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 OR2M2Q96R28 347 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 EMC6Q9BV81 110 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 POLDIP3Q9BY77 421 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 MAGIXQ9H6Y5 334 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 MED29Q9NX70 200 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 NOTCH2Q04721 2471 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 ABCA12Q86UK0 2595 aa16.73■□□□□ 0.27
PDLIM7-204ENST00000393546 ALPK2Q86TB3 2170 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 EFCAB9A8MZ26 197 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 ACOT8O14734 319 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 RAD51DO75771 328 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 GADD45GO95257 159 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 ITGA5P08648 1049 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 SAGP10523 405 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 IFNGR1P15260 489 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 MAKP20794 623 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 AQP2P41181 271 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 SPIBQ01892 262 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 CHRNB3Q05901 458 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 RPL18Q07020 188 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 TAB1Q15750 504 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 GABRA6Q16445 453 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 FAM98BQ52LJ0 330 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 TIMM23BQ5SRD1 257 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 ALKBH2Q6NS38 261 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 HMBOX1Q6NT76 420 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 SSX8Q7RTT4 187 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 OR52J3Q8NH60 311 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 LRR1Q96L50 414 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 ADAD1Q96M93 576 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 MUS81Q96NY9 551 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 CLEC4MQ9H2X3 399 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 NGBQ9NPG2 151 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 TMEM5Q9Y2B1 443 aa16.72■□□□□ 0.27
PDLIM7-204ENST00000393546 A0A1W2PRG6 482 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 OR5H1A6NKK0 313 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 HRGP04196 525 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 TSPAN19P0C672 248 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 SLC9A3P48764 834 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 BIDP55957 195 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 KRTAP10-9P60411 292 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 LGALS3BPQ08380 585 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 CAMK2DQ13557 499 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 LAPTM4AQ15012 233 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 ANKDD1AQ495B1 522 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 BEX5Q5H9J7 111 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 CARD17Q5XLA6 110 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 TMPRSS11FQ6ZWK6 438 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 OAFQ86UD1 273 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 C20orf196Q8IYI0 205 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 TMEM123Q8N131 208 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 C1orf162Q8NEQ5 155 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 OR6X1Q8NH79 312 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 LURAP1Q96LR2 239 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 CADM1Q9BY67 442 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 KRCC1Q9NPI7 259 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 B3GAT2Q9NPZ5 323 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 INIPQ9NRY2 104 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 HIF3AQ9Y2N7 669 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 APCP25054 2843 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 ABCA4P78363 2273 aa16.71■□□□□ 0.27
PDLIM7-204ENST00000393546 TRBV4-1A0A0J9YWV2 114 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 AQP12BA6NM10 295 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 DEFB108AA8MXU0 73 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 RPL36A-HNRNPH2H7BZ11 118 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 KLF4O43474 513 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 KRT36O76013 467 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 BCL10O95999 233 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 F13BP05160 661 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 CDH2P19022 906 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 ROR2Q01974 943 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 PPA1Q15181 289 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 MEX3DQ86XN8 651 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 AQP12AQ8IXF9 295 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 OR4K5Q8NGD3 323 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 OR6N1Q8NGY5 312 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 MOSPD2Q8NHP6 518 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 PIK3IP1Q96FE7 263 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 ALKBH3Q96Q83 286 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 GPR35Q9HC97 309 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 TMCC3Q9ULS5 477 aa16.7■□□□□ 0.26
PDLIM7-204ENST00000393546 SH3PXD2BA1X283 911 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 MCIDASD6RGH6 385 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 M0R3G1 203 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 CLOCKO15516 846 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 RRM2P31350 389 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 GPR4P46093 362 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 FLOT2Q14254 428 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms