RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LINC00299Q6ZSB3 139 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 PRICKLE2Q7Z3G6 844 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 BPHLQ86WA6 291 aaPredicted RBP14.83□□□□□ -0.04
COL2A1-202ENST00000380518 SPPL3Q8TCT6 385 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF775Q96BV0 537 aaPredicted RBP14.83□□□□□ -0.04
COL2A1-202ENST00000380518 CNTNAP3Q9BZ76 1288 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 SELENOIQ9C0D9 397 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 C1orf123Q9NWV4 160 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 SPHK1Q9NYA1 384 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 FBXL2Q9UKC9 423 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 EMC9Q9Y3B6 208 aa14.83□□□□□ -0.04
COL2A1-202ENST00000380518 ARGFXA6NJG6 315 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 MSTNO14793 375 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF750Q32MQ0 723 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 AFMIDQ63HM1 303 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 KIR3DX1Q9H7L2 352 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 MYOTQ9UBF9 498 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 RGPD1P0DJD0 1748 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 PAPLNO95428 1278 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 SNRNP70P08621 437 aaKnown RBP14.82□□□□□ -0.04
COL2A1-202ENST00000380518 DCAF12Q5T6F0 453 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 BCDIN3DQ7Z5W3 292 aaKnown RBP14.82□□□□□ -0.04
COL2A1-202ENST00000380518 STACQ99469 402 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 MCOLN1Q9GZU1 580 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 LYRM4Q9HD34 91 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 DUSP22Q9NRW4 184 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 TM7SF3Q9NS93 570 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 OR14J1Q9UGF5 321 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 MED16Q9Y2X0 877 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.82□□□□□ -0.04
COL2A1-202ENST00000380518 MYH9P35579 1960 aaKnown RBP14.82□□□□□ -0.04
COL2A1-202ENST00000380518 FADS1O60427 444 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 GMDSO60547 372 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 CPT2P23786 658 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 ADPRMQ3LIE5 342 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 STEAP1BQ6NZ63 245 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 C11orf54Q9H0W9 315 aaPredicted RBP14.82□□□□□ -0.04
COL2A1-202ENST00000380518 PPT2Q9UMR5 302 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 H3BNC9 293 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 BET1O15155 118 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 ATP1B1P05026 303 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 IL32P24001 234 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 PLA2G7Q13093 441 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 ALKAL2Q6UX46 152 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 OR51D1Q8NGF3 324 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 OR6M1Q8NGM8 313 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 OLIG1Q8TAK6 271 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 MUCL1Q96DR8 90 aa14.82□□□□□ -0.04
COL2A1-202ENST00000380518 TNFRSF10CO14798 259 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 HOXC11O43248 304 aaPredicted RBP14.81□□□□□ -0.04
COL2A1-202ENST00000380518 ISL1P61371 349 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 PDLIM3Q53GG5 364 aaPredicted RBP14.81□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF836Q6ZNA1 936 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 SIAH3Q8IW03 269 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 SERTAD4Q9NUC0 356 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 A0A087WUU8 490 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 LRIT2A6NDA9 550 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 FABP7O15540 132 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 GLCEO94923 617 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 NKAIN3Q8N8D7 197 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 OR6C1Q96RD1 312 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 UTP23Q9BRU9 249 aaKnown RBP14.81□□□□□ -0.04
COL2A1-202ENST00000380518 C1QTNF3Q9BXJ4 246 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 FAM212BQ9NTI7 297 aaPredicted RBP14.81□□□□□ -0.04
COL2A1-202ENST00000380518 HS3ST3A1Q9Y663 406 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 POM121CA8CG34 1229 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 CLEC2LP0C7M8 214 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 IKZF1Q13422 519 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 SLC36A2Q495M3 483 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 Q6ZTK2 550 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 HAS2Q92819 552 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 PDXPQ96GD0 296 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 OCSTAMPQ9BR26 566 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 STEAP1Q9UHE8 339 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 CLEC2DQ9UHP7 191 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 CHD4Q14839 1912 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 GFYI3L273 518 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 SULT1B1O43704 296 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 CD53P19397 219 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 SRPXP78539 464 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 LRRC26Q2I0M4 334 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 LPCAT3Q6P1A2 487 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 CD300LGQ6UXG3 332 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 RBMXL1Q96E39 390 aaKnown RBP14.81□□□□□ -0.04
COL2A1-202ENST00000380518 TSSK2Q96PF2 358 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 PRR14Q9BWN1 585 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 CHST8Q9H2A9 424 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 GALNT9Q9HCQ5 603 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 TRAPPC2LQ9UL33 140 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 LHX6Q9UPM6 363 aa14.81□□□□□ -0.04
COL2A1-202ENST00000380518 TMEM129A0AVI4 362 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 I6L893 689 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 P2RY10O00398 339 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 MT-ATP6P00846 226 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 KIAA1024LP59773 190 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 GABREP78334 506 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 AADACL3Q5VUY0 350 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 PGAP1Q75T13 922 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 WDR5BQ86VZ2 330 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 OR5D18Q8NGL1 313 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms