RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DMXL1Q9Y485 3027 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 A0A1B0GVI7 797 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 IFITM5A6NNB3 132 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 UTS2O95399 124 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 RENP00797 406 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 ADRB1P08588 477 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 CD3GP09693 182 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 RAB40ALP0C0E4 278 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 ASAH2BP0C7U1 165 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 CD1CP29017 333 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 HOXA6P31267 233 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 UQCRC1P31930 480 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 EVI2BP34910 448 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 RORAP35398 523 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 AQP2P41181 271 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 MNDAP41218 407 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 SCAND1P57086 179 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 GNG2P59768 71 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 CTXN1P60606 82 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 DGCR2P98153 550 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 SRSF5Q13243 272 aaKnown RBP12.69□□□□□ -0.38
HMGCL-203ENST00000374490 KLF9Q13886 244 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-203ENST00000374490 ERV3-1Q14264 604 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 WDR45BQ5MNZ6 344 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 FAM122BQ7Z309 247 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 FGD2Q7Z6J4 655 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 CARFQ8N187 725 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 LSM14AQ8ND56 463 aaKnown RBP12.69□□□□□ -0.38
HMGCL-203ENST00000374490 OR56B4Q8NH76 319 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 PHOSPHO1Q8TCT1 267 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 Q96M85 177 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 ZFP3Q96NJ6 502 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 DERL3Q96Q80 235 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 MMP25Q9NPA2 562 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 UCKL1Q9NWZ5 548 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 SOHLH2Q9NX45 425 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 TMEM14AQ9Y6G1 99 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 V9GY05 133 aa12.69□□□□□ -0.38
HMGCL-203ENST00000374490 EML5Q05BV3 1969 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 TRABD2BA6NFA1 517 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 PRAF2O60831 178 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 HIST1H2ABP04908 130 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 BCKDHBP21953 392 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 PSMB10P40306 273 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 CDKN2AP42771 156 aaKnown RBP12.68□□□□□ -0.38
HMGCL-203ENST00000374490 SRP9P49458 86 aaKnown RBP12.68□□□□□ -0.38
HMGCL-203ENST00000374490 EPHA4P54764 986 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 FCN2Q15485 313 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 Q5BKY6 102 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 C6orf183Q5T699 404 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 THOC7Q6I9Y2 204 aaKnown RBP12.68□□□□□ -0.38
HMGCL-203ENST00000374490 LRRN1Q6UXK5 716 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 HIST3H2AQ7L7L0 130 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 NANOGNBQ7Z5D8 188 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 WDR5BQ86VZ2 330 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 CDC20BQ86Y33 519 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 SDR16C5Q8N3Y7 309 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 OR4D9Q8NGE8 314 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 ZPLD1Q8TCW7 415 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 LMX1AQ8TE12 382 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 HIST1H2ACQ93077 130 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 PHF21AQ96BD5 680 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 MVB12AQ96EY5 273 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 LCORQ96JN0 433 aaPredicted RBP12.68□□□□□ -0.38
HMGCL-203ENST00000374490 ADAD1Q96M93 576 aaKnown RBP12.68□□□□□ -0.38
HMGCL-203ENST00000374490 PDCD1LG2Q9BQ51 273 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 FKRPQ9H9S5 495 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 GRHPRQ9UBQ7 328 aa12.68□□□□□ -0.38
HMGCL-203ENST00000374490 A0A1B0GVC2 190 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 A6NIN4 97 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 BLOC1S5-TXNDC5H3BN57 136 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 PIN1P1O15428 100 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 MAGEB4O15481 346 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-203ENST00000374490 GIFP27352 417 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 CCR4P51679 360 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 SLC37A1P57057 533 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.38
HMGCL-203ENST00000374490 EGR3Q06889 387 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 DBPQ10586 325 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-203ENST00000374490 SNTB2Q13425 540 aaKnown RBP12.67□□□□□ -0.38
HMGCL-203ENST00000374490 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
HMGCL-203ENST00000374490 CD226Q15762 336 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 Q499Y3 187 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 ELFN2Q5R3F8 820 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 SNAP47Q5SQN1 464 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 FAM205BPQ63HN1 556 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 C17orf82Q86X59 251 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-203ENST00000374490 TMEM151BQ8IW70 566 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 CMTM4Q8IZR5 234 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 DTX3Q8N9I9 347 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 ZSCAN1Q8NBB4 408 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 ZNRF4Q8WWF5 429 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 ZDHHC12Q96GR4 267 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 KLHL15Q96M94 604 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 TCF7L1Q9HCS4 588 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms