RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FAM157CP0CG43 387 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 BMP7P18075 431 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 AKR1C3P42330 323 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 MAPK8P45983 427 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 CAV2P51636 162 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 OR7A5Q15622 319 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 PYY3Q5JQD4 70 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 CNKSR3Q6P9H4 555 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 NUDT13Q86X67 352 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 AKR7LQ8NHP1 331 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 SLC2A12Q8TD20 617 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 TFGQ92734 400 aaPredicted RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 SLAMF9Q96A28 289 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 MEGF10Q96KG7 1140 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 MCHR1Q99705 422 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 KRCC1Q9NPI7 259 aaPredicted RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 HAO2Q9NYQ3 351 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 PPP4R1LQ9P1A2 415 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 NCDNQ9UBB6 729 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 UPB1Q9UBR1 384 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 FBXL4Q9UKA2 621 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 TRPV2Q9Y5S1 764 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 GXYLT2A0PJZ3 443 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 CPED1A4D0V7 1026 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 A6NLC8 198 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 IDSB3KWA1 339 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 SMAD9O15198 467 aaKnown RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 XRCC3O43542 346 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 NARSO43776 548 aaKnown RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 CXCL10P02778 98 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 RPLP2P05387 115 aaKnown RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 MELTFP08582 738 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 SERPINA4P29622 427 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 SMAD3P84022 425 aaKnown RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 SKP2Q13309 424 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 TMED4Q7Z7H5 227 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 BAP18Q8IXM2 172 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF614Q8N883 585 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 RAB3CQ96E17 227 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 HS6ST2Q96MM7 605 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 NECAB3Q96P71 396 aaPredicted RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 TAAR9Q96RI9 348 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 FKRPQ9H9S5 495 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 PLXND1Q9Y4D7 1925 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 LOC390937A0A1W2PQ73 354 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 BLOC1S5-TXNDC5H3BN57 136 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 TBL1XO60907 577 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 CD3DP04234 171 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 GYPBP06028 91 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 RAB5AP20339 215 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 ACKR3P25106 362 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SPINT3P49223 89 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 RBP2P50120 134 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 RGS8P57771 180 aaPredicted RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 TMEM115Q12893 351 aaPredicted RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 AIMP2Q13155 320 aaKnown RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 FIGNL1Q6PIW4 674 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 DND1Q8IYX4 353 aaKnown RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SYS1Q8N2H4 156 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 TET1Q8NFU7 2136 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 OR4K14Q8NGD5 310 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 TMED6Q8WW62 240 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 CD180Q99467 661 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SLITRK2Q9H156 845 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 HRH4Q9H3N8 390 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 GLIPR2Q9H4G4 154 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 RPS10P5Q9NQ39 176 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SIDT1Q9NXL6 827 aaKnown RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 CCSO14618 274 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 TSPAN6O43657 245 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 IFNGP01579 166 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 IRF1P10914 325 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 CD34P28906 385 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 MAGEB1P43366 347 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 EPHB3P54753 998 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 ACTA2P62736 377 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 ACTG2P63267 376 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 LASP1Q14847 261 aaKnown RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 MLC1Q15049 377 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 TGIF1Q15583 401 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 CTXN3Q4LDR2 81 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 YOD1Q5VVQ6 348 aaPredicted RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 REC114Q7Z4M0 266 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 CYB561A3Q8NBI2 242 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 NUBPLQ8TB37 319 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 NUDCD2Q8WVJ2 157 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 DVL3Q92997 716 aaPredicted RBP11.81□□□□□ -0.52
PRPF4-201ENST00000374198 UBE2E3Q969T4 207 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 PLD4Q96BZ4 506 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 ALG14Q96F25 216 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SGPP1Q9BX95 441 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 CHRDQ9H2X0 955 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SUV39H2Q9H5I1 410 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SLC7A7Q9UM01 511 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 KCNE3Q9Y6H6 103 aa11.81□□□□□ -0.52
PRPF4-201ENST00000374198 TGM5O43548 720 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 GPRIN2O60269 458 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 CD14P08571 375 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms