RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 AGAP4Q96P64 663 aa12.03□□□□□ -0.48
NCDN-203ENST00000373253 NECAB3Q96P71 396 aaPredicted RBP12.03□□□□□ -0.48
NCDN-203ENST00000373253 CACNG6Q9BXT2 260 aa12.03□□□□□ -0.48
NCDN-203ENST00000373253 SEMA4CQ9C0C4 833 aa12.03□□□□□ -0.48
NCDN-203ENST00000373253 MIXL1Q9H2W2 232 aa12.03□□□□□ -0.48
NCDN-203ENST00000373253 PLSCR3Q9NRY6 295 aa12.03□□□□□ -0.48
NCDN-203ENST00000373253 FKBP14Q9NWM8 211 aa12.03□□□□□ -0.48
NCDN-203ENST00000373253 KCNG2Q9UJ96 466 aa12.03□□□□□ -0.48
NCDN-203ENST00000373253 FARSAQ9Y285 508 aaKnown RBP12.03□□□□□ -0.48
NCDN-203ENST00000373253 TRDV1A0A1B0GX56 115 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 DCTN6O00399 190 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 BHLHE40O14503 412 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 FZD7O75084 574 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 TACSTD2P09758 323 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 SNTB2Q13425 540 aaKnown RBP12.02□□□□□ -0.48
NCDN-203ENST00000373253 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 DEFB123Q8N688 67 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 OR2T4Q8NH00 348 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 BRIX1Q8TDN6 353 aaKnown RBP12.02□□□□□ -0.48
NCDN-203ENST00000373253 RNF121Q9H920 327 aa12.02□□□□□ -0.48
NCDN-203ENST00000373253 LSM2Q9Y333 95 aaKnown RBP12.02□□□□□ -0.48
NCDN-203ENST00000373253 TNFRSF10AO00220 468 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 SIGLEC6O43699 453 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 TFP02787 698 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 CD14P08571 375 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 GPR3P46089 330 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 FXYD6P3P58550 94 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ZNF117Q03924 483 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 SPOCK1Q08629 439 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 MGAT2Q10469 447 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ZNF79Q15937 498 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 TRIM61Q5EBN2 209 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ZCCHC12Q6PEW1 402 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 TMED4Q7Z7H5 227 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 KIAA1958Q8N8K9 716 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ASCC1Q8N9N2 400 aaKnown RBP12.02□□□□□ -0.49
NCDN-203ENST00000373253 PTPMT1Q8WUK0 201 aaPredicted RBP12.02□□□□□ -0.49
NCDN-203ENST00000373253 TAAR8Q969N4 342 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 SPACA5Q96QH8 159 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 GPER1Q99527 375 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 CMKLR1Q99788 373 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 FGF20Q9NP95 211 aaPredicted RBP12.02□□□□□ -0.49
NCDN-203ENST00000373253 TMED7-TICAM2A0A0A6YYA0 188 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 A0A1B0GX78 115 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ZNF879B4DU55 563 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ABCD3P28288 659 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 GPR85P60893 370 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ACTC1P68032 377 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ACTA1P68133 377 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 CCL7P80098 99 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 FMODQ06828 376 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 SGCAQ16586 387 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 TMEM201Q5SNT2 666 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 TMEM69Q5SWH9 247 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 RAET1LQ5VY80 246 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 MAMDC2Q7Z304 686 aaPredicted RBP12.02□□□□□ -0.49
NCDN-203ENST00000373253 PLPP7Q8NBV4 271 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 TOR1AIP2Q8NFQ8 470 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ASB12Q8WXK4 309 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 PELI1Q96FA3 418 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 ZNF578Q96N58 590 aaPredicted RBP12.02□□□□□ -0.49
NCDN-203ENST00000373253 CCDC32Q9BV29 185 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 SRRQ9GZT4 340 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 KCNK15Q9H427 330 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 TMED7Q9Y3B3 224 aa12.02□□□□□ -0.49
NCDN-203ENST00000373253 EFCAB7A8K855 629 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ITGA10O75578 1167 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 OR7A10O76100 309 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 PRKACBP22694 351 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ZNF41P51814 821 aaPredicted RBP12.01□□□□□ -0.49
NCDN-203ENST00000373253 PRPS1P60891 318 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 DGCR2P98153 550 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 PRTGQ2VWP7 1150 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 EEF1A1P5Q5VTE0 462 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 OR10K2Q6IF99 312 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 SIGLEC11Q96RL6 698 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 FUZQ9BT04 418 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ANKRD19PQ9H560 264 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ADGRL4Q9HBW9 690 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ING3Q9NXR8 418 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ZNF407Q9C0G0 2248 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 FAM25EA8MYX2 175 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 PITPNBP48739 271 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ACKR1Q16570 336 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 MANEAQ5SRI9 462 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.01□□□□□ -0.49
NCDN-203ENST00000373253 PPP1R3BQ86XI6 285 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 MINDY2Q8NBR6 621 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 OR7G1Q8NGA0 311 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 SLC46A1Q96NT5 459 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 WDR77Q9BQA1 342 aaPredicted RBP12.01□□□□□ -0.49
NCDN-203ENST00000373253 ERVMER34-1Q9H9K5 563 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 ICMTO60725 284 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 OR2J2O76002 312 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 SERPINA3P01011 423 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 KIR2DL3P43628 341 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 PRSS12P56730 875 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 NXPH1P58417 271 aa12.01□□□□□ -0.49
NCDN-203ENST00000373253 EIF2B1Q14232 305 aaKnown RBP12.01□□□□□ -0.49
NCDN-203ENST00000373253 FGFBP1Q14512 234 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms