RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 KRBOX4Q5JUW0 171 aa18.13■□□□□ 0.49
LMO4-202ENST00000370544 BEST4Q8NFU0 473 aa18.13■□□□□ 0.49
LMO4-202ENST00000370544 PATE1Q8WXA2 126 aa18.13■□□□□ 0.49
LMO4-202ENST00000370544 MRPS28Q9Y2Q9 187 aaKnown RBP18.13■□□□□ 0.49
LMO4-202ENST00000370544 C2orf72A6NCS6 295 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 KLK8O60259 260 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 DOK2O60496 412 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 LGI1O95970 557 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 MT-ATP6P00846 226 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 RAB5BP61020 215 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 SNRPGP62308 76 aaKnown RBP18.12■□□□□ 0.49
LMO4-202ENST00000370544 DUSP7Q16829 419 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 GIMAP1Q8WWP7 306 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 OR14A2Q96R54 314 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 F8W036 122 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 OR7C1O76099 320 aaPredicted RBP18.12■□□□□ 0.49
LMO4-202ENST00000370544 BLOC1S1P78537 153 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 ZNF511Q8NB15 262 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 OR52A5Q9H2C5 316 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 ITGB2P05107 769 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 CCR2P41597 374 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 COMTD1Q86VU5 262 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 TMEM178AQ8NBL3 297 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 SGPP1Q9BX95 441 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 IL21Q9HBE4 155 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 PLRG1O43660 514 aaKnown RBP18.12■□□□□ 0.49
LMO4-202ENST00000370544 CCR5P51681 352 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 PPP2CBP62714 309 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 PPP2CAP67775 309 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 MEP1BQ16820 701 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 YIF1BQ5BJH7 314 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 YOD1Q5VVQ6 348 aaPredicted RBP18.12■□□□□ 0.49
LMO4-202ENST00000370544 GRINAQ7Z429 371 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 RAB3CQ96E17 227 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 SNX18Q96RF0 628 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 ANKRD10Q9NXR5 420 aa18.12■□□□□ 0.49
LMO4-202ENST00000370544 DHRS4L2Q6PKH6 230 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 RAB39BQ96DA2 213 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 GLCEO94923 617 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 UBCP0CG48 685 aaKnown RBP18.11■□□□□ 0.49
LMO4-202ENST00000370544 SLC19A1P41440 591 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 CYB561P49447 251 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 OR1J2Q8NGS2 313 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 OR52N1Q8NH53 320 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 BAHD1Q8TBE0 780 aaPredicted RBP18.11■□□□□ 0.49
LMO4-202ENST00000370544 SLC35A4Q96G79 324 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 ATP13A2Q9NQ11 1180 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 TMPRSS11DO60235 418 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 SELENOFO60613 162 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 CTSLP07711 333 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 NKAIN1Q4KMZ8 207 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 NKAIN4Q8IVV8 208 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 NIPAL2Q9H841 368 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 KLRC4-KLRK1H3BQV0 150 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 HOXB5P09067 269 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 RBMS2Q15434 407 aaKnown RBP18.11■□□□□ 0.49
LMO4-202ENST00000370544 ZNF385BQ569K4 471 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 ZNF585AQ6P3V2 769 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 GPR155Q7Z3F1 870 aa18.11■□□□□ 0.49
LMO4-202ENST00000370544 TRBV5-4A0A0C4DH59 114 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 SURF4O15260 269 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 TIMM8AO60220 97 aaPredicted RBP18.1■□□□□ 0.49
LMO4-202ENST00000370544 GDNFP39905 211 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 P2RX1P51575 399 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 RPS18P62269 152 aaKnown RBP18.1■□□□□ 0.49
LMO4-202ENST00000370544 IKZF1Q13422 519 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 SMAD4Q13485 552 aaKnown RBP18.1■□□□□ 0.49
LMO4-202ENST00000370544 BPHLQ86WA6 291 aaPredicted RBP18.1■□□□□ 0.49
LMO4-202ENST00000370544 LHX6Q9UPM6 363 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 ZNF814B7Z6K7 855 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 ZNF587BE7ETH6 402 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 TNFSF12O43508 249 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 SLC14A1Q13336 389 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 SLC9A3R2Q15599 337 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 USF2Q15853 346 aaPredicted RBP18.1■□□□□ 0.49
LMO4-202ENST00000370544 GOT1L1Q8NHS2 421 aaPredicted RBP18.1■□□□□ 0.49
LMO4-202ENST00000370544 KCNG3Q8TAE7 436 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 IFI44Q8TCB0 444 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 MRGPRX1Q96LB2 322 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 SMIM3Q9BZL3 60 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 FBXW12Q6X9E4 464 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 H1FNTQ75WM6 255 aaPredicted RBP18.1■□□□□ 0.49
LMO4-202ENST00000370544 OR4D6Q8NGJ1 314 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 SDF2Q99470 211 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 FGF17O60258 216 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 VHLLQ6RSH7 139 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 ZNF813Q6ZN06 617 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 OR5D18Q8NGL1 313 aa18.1■□□□□ 0.49
LMO4-202ENST00000370544 SHOXO15266 292 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 ZNF780AO75290 641 aaPredicted RBP18.09■□□□□ 0.49
LMO4-202ENST00000370544 NID1P14543 1247 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 OR56B4Q8NH76 319 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 DCBLD2Q96PD2 775 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 OSGIN1Q9UJX0 560 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 TMEM82A0PJX8 343 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 AADACL4Q5VUY2 407 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 SLC25A31Q9H0C2 315 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 MCRIP1C9JLW8 97 aa18.09■□□□□ 0.49
LMO4-202ENST00000370544 LCMT2O60294 686 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms