RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 P2RY8Q86VZ1 359 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 CCNYL1Q8N7R7 359 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 OR6Q1Q8NGQ2 317 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 FBXO27Q8NI29 283 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.82□□□□□ -0.84
RTN3-204ENST00000354497 FAM110BQ8TC76 370 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 SLC47A1Q96FL8 570 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 RNF170Q96K19 258 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 SORCS2Q96PQ0 1159 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ZNF300Q96RE9 604 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 BPESC1Q9GZL8 116 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 GP6Q9HCN6 339 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 HHATLQ9HCP6 504 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 NPIPA5A0A0B4J1W7 369 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 A0A1W2PNR3 127 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ALG1L2C9J202 215 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 NPIPA7E9PJI5 369 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 PPP6CO00743 305 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 SNNO75324 88 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 OR4F21O95013 312 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 OTCP00480 354 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 APOC1P02654 83 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 NPIPA8P0DM63 369 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 APEX1P27695 318 aaKnown RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 SLC7A1P30825 629 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 NTSP30990 170 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 RPS5P46782 204 aaKnown RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 ARHGDIBP52566 201 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 PRKAA2P54646 552 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 CDH13P55290 713 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 RAE1P78406 368 aaKnown RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 IFITM3Q01628 133 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ACSM2AQ08AH3 577 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 C2orf80Q0P641 193 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 RASGEF1BQ0VAM2 473 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 PMS2P3Q13401 168 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 TOP3AQ13472 1001 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 ARL13AQ5H913 290 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 TECRLQ5HYJ1 363 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ACSM2BQ68CK6 577 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 OR7E24Q6IFN5 339 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ZNF773Q6PK81 442 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 SLC46A3Q7Z3Q1 461 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 SZRD1Q7Z422 152 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 SLC43A2Q8N370 569 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ZNF433Q8N7K0 673 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 IL17RDQ8NFM7 739 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 OR4C3Q8NH37 302 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ZFP90Q8TF47 636 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 LMF2Q9BU23 707 aaKnown RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 C9orf16Q9BUW7 83 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 METTL17Q9H7H0 456 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 NIPAL2Q9H841 368 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 FKRPQ9H9S5 495 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 EFCAB1Q9HAE3 211 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 MIEF1Q9NQG6 463 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ZC4H2Q9NQZ6 224 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 PRELID3BQ9Y3B1 194 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 FREM1Q5H8C1 2179 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 MALRD1Q5VYJ5 2156 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 LOC390937A0A1W2PQ73 354 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 HMX3A6NHT5 357 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 C12orf71A8MTZ7 269 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 LEUTXA8MZ59 168 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 MYO1GB0I1T2 1018 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 H3BUI4 141 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 MANBAO00462 879 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 SCDO00767 359 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 CTDSP2O14595 271 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 ZNF195O14628 629 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 SMAD9O15198 467 aaKnown RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 RGS14O43566 566 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 DBTP11182 482 aaKnown RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 BMP2P12643 396 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 TCN1P20061 433 aaPredicted RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 RAB3AP20336 220 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 COX5AP20674 150 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 ELK4P28324 431 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 TIA1P31483 386 aaKnown RBP eCLIP9.81□□□□□ -0.84
RTN3-204ENST00000354497 APOBEC3AP31941 199 aaPredicted RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 EIF1P41567 113 aaKnown RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 HTR3AP46098 478 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 PRKAG1P54619 331 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 SNRPD2P62316 118 aaKnown RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 FLI1Q01543 452 aaPredicted RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 GK3PQ14409 553 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 DGUOKQ16854 277 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 PRSS53Q2L4Q9 553 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 ATAD3CQ5T2N8 411 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 ZBTB37Q5TC79 503 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 TTC33Q6PID6 262 aaPredicted RBP9.81□□□□□ -0.84
RTN3-204ENST00000354497 OR2L13Q8N349 312 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 SVOPQ8N4V2 548 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 ZFAND1Q8TCF1 268 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 PTP4A1Q93096 173 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 APIPQ96GX9 242 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 GLIPR2Q9H4G4 154 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 COQ10BQ9H8M1 238 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 BCO1Q9HAY6 547 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 GLTPQ9NZD2 209 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms