RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CD180Q99467 661 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 NICN1Q9BSH3 213 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MKKSQ9NPJ1 570 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TBC1D3BA6NDS4 549 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 KNG1P01042 644 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ARNTP27540 789 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MAS1LP35410 378 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FAM74A1Q5RGS3 127 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TBC1D3GQ6DHY5 549 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MRPL54Q6P161 138 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MORN3Q6PF18 240 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RNF148Q8N7C7 305 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 NRP1O14786 923 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ABOP16442 354 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SSTR3P32745 418 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SOX3P41225 446 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 C10orf120Q5SQS8 335 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF676Q8N7Q3 588 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 BIRC7Q96CA5 298 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 STARD4Q96DR4 205 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OPN3Q9H1Y3 402 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GPR160Q9UJ42 338 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 DOCK8Q8NF50 2099 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OTOL1A6NHN0 477 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ARPC3O15145 178 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 EEDO75530 441 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ALDOBP05062 364 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CD1AP06126 327 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FMO3P31513 532 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZDHHC14Q8IZN3 488 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR52R1Q8NGF1 315 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR10D4PQ8NGN7 298 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CNN2Q99439 309 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CYSLTR2Q9NS75 346 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GPR83Q9NYM4 423 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SPATA31A1Q5TZJ5 1347 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SPATA31A5Q5VU36 1347 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SPATA31A7Q8IWB4 1347 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM213A2RRL7 107 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 HLA-DOBP13765 273 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RPS16P62249 146 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 HTR4Q13639 388 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TPBGQ13641 420 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SLC24A5Q71RS6 500 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR13C8Q8NGS7 320 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR14A16Q8NHC5 309 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GNPDA2Q8TDQ7 276 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 WASHC3Q9Y3C0 194 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 WDR27A2RRH5 827 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 NMBP08949 121 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GPR17Q13304 367 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 HFEQ30201 348 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PLEKHS1Q5SXH7 462 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MFSD14CQ5VZR4 134 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SAMD8Q96LT4 415 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CRTAC1Q9NQ79 661 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 BCS1LQ9Y276 419 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR10H1Q9Y4A9 318 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PXDNQ92626 1479 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 A0A1B0GW64 132 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR52A4PA6NMU1 304 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 STC2O76061 302 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RPL7P18124 248 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 NCMAPQ5T1S8 102 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 LYPD8Q6UX82 237 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF813Q6ZN06 617 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RNF133Q8WVZ7 376 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 KCNA7Q96RP8 456 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SYT17Q9BSW7 474 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR2J1Q9GZK6 312 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM9BQ9NQ34 198 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PSORS1C1Q9UIG5 152 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM129A0AVI4 362 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 KLRG2A4D1S0 409 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 C9orf172C9J069 976 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SNRPEP62304 92 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MRPS6P82932 125 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SGCAQ16586 387 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF573Q86YE8 665 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 BAP18Q8IXM2 172 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF679Q8IYX0 411 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 WBP1LQ9NX94 342 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TBC1D3FA6NER0 549 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RNF225M0QZC1 329 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 DLEU1O43261 78 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 AMD1P17707 334 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 DOC2BQ14184 412 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 HBMQ6B0K9 141 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SERPINA11Q86U17 422 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PRR18Q8N4B5 295 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 IL12RB2Q99665 862 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ANAPC13Q9BS18 74 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SGPP1Q9BX95 441 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FBXW11Q9UKB1 542 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 KCNK5O95279 499 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 NDUFC2O95298 119 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR1D4P47884 311 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MTCP1P56278 107 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ERVK-16P61578 105 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 LGALSLQ3ZCW2 172 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms