RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 RAB1AP62820 205 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 CST6Q15828 149 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF79Q15937 498 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 GKN2Q86XP6 184 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 NKAIN4Q8IVV8 208 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SLC22A24Q8N4F4 322 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR2A12Q8NGT7 310 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 HAS2Q92819 552 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 RAB3CQ96E17 227 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 TCEAL2Q9H3H9 227 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 CPNE7Q9UBL6 633 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 FAM171A2A8MVW0 826 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 FKTNO75072 461 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 FBXO24O75426 580 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 HBE1P02100 147 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SIM1P81133 766 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 IFITM2Q01629 132 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PRRT3Q5FWE3 981 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 GALNT16Q8N428 558 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR10R2Q8NGX6 335 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 LINC00615Q96LM1 132 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR11A1Q9GZK7 315 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 MMP26Q9NRE1 261 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SERTAD3Q9UJW9 196 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 EXO1Q9UQ84 846 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ADAM18Q9Y3Q7 739 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 NUP214P35658 2090 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ETHE1O95571 254 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 HBQ1P09105 142 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PCBP3P57721 371 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 MPPED2Q15777 294 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 LDLRAD1Q5T700 205 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 MSRB3Q8IXL7 192 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR52R1Q8NGF1 315 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SLC22A8Q8TCC7 542 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PPP1R1CQ8WVI7 109 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SCLYQ96I15 445 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 KLK11Q9UBX7 282 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR2T1O43869 369 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 B3GALNT1O75752 331 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 STK17BO94768 372 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 KLKB1P03952 638 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 NID1P14543 1247 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 HIST1H1CP16403 213 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SEC13P55735 322 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 NIPAL3Q6P499 406 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 KCNIP4Q6PIL6 250 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 DUSP22Q9NRW4 184 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 RAB22AQ9UL26 194 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 LSM5Q9Y4Y9 91 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF646O15015 1829 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 IHHQ14623 411 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 CNN3Q15417 329 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF425Q6IV72 752 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SLC30A7Q8NEW0 376 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR2AK2Q8NG84 335 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 DEFB118Q96PH6 123 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 NICN1Q9BSH3 213 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 BARHL1Q9BZE3 327 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 UBE2J1Q9Y385 318 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 KCNE1BA0A087WTH5 132 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TRBV5-3A0A0A0MS03 114 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM72A0PK05 275 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SSX4O60224 188 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FZD6O60353 706 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 GNRHRP30968 328 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PPT1P50897 306 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CAV2P51636 162 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 GLYATL3Q5SZD4 288 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 B3GNTL1Q67FW5 361 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 OR4D10Q8NGI6 311 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PGAM5Q96HS1 289 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ENKD1Q9H0I2 346 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 C1orf198Q9H425 327 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SPHK1Q9NYA1 384 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CSAG2Q9Y5P2 127 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 OTOFQ9HC10 1997 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SEMG1P04279 462 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 GJA5P36382 358 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CTBSQ01459 385 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF74Q16587 644 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 HNRNPA1L2Q32P51 320 aaKnown RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF385BQ569K4 471 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 AADACL4Q5VUY2 407 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FCRL6Q6DN72 434 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LCN10Q6JVE6 187 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM88Q6PEY1 159 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LIMS2Q7Z4I7 341 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 HSD17B13Q7Z5P4 300 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CMTM4Q8IZR5 234 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CSNK1A1LQ8N752 337 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 WDR92Q96MX6 357 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CLDND1Q9NY35 253 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 MSRAQ9UJ68 235 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TRAV20A0A0B4J274 112 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 HOXB2P14652 356 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 RAD52P43351 418 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF133P52736 654 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 MFSD12Q6NUT3 480 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms