RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CCL3P10147 92 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 CD40LGP29965 261 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 OTX2P32243 289 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 S100A5P33763 92 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 NANOS3P60323 173 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ACSM1Q08AH1 577 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SPEM2Q0P670 501 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 TRA2AQ13595 282 aaKnown RBP eCLIP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 KRR1Q13601 381 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MS4A18Q3C1V0 323 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 DHRS13Q6UX07 377 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 GDPGP1Q6ZNW5 385 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RAB11FIP2Q7L804 512 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 DPY19L4Q7Z388 723 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 OR5L2Q8NGL0 311 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 OR2Y1Q8NGV0 311 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 POC1BQ8TC44 478 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 S100ZQ8WXG8 99 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SPACA9Q96E40 222 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 TXNDC15Q96J42 360 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 C5orf34Q96MH7 638 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 CNN2Q99439 309 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 EMC6Q9BV81 110 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 WDR12Q9GZL7 423 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 WDR54Q9H977 334 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 FKRPQ9H9S5 495 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MED29Q9NX70 200 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 FOXJ2Q9P0K8 574 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 PPP4R1LQ9P1A2 415 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 NCDNQ9UBB6 729 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 COMMD3Q9UBI1 195 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 KLHL21Q9UJP4 597 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MRPS18BQ9Y676 258 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 AKAP13Q12802 2813 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 LOC102723996A0A087X1L8 192 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 IGKV1D-43A0A0B4J1Z2 117 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 LINC00854A0A1B0GVQ3 168 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF814B7Z6K7 855 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 C9orf172C9J069 976 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 PLPP3O14495 311 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RAMP1O60894 148 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MT-ND5P03915 603 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 FBXO45P0C2W1 286 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 IMPDH2P12268 514 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 FGF9P31371 208 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 EFR3AQ14156 821 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF528Q3MIS6 628 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 DCAF12Q5T6F0 453 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 LRRC69Q6ZNQ3 347 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC35D2Q76EJ3 337 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SPATC1Q76KD6 591 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 CCDC190Q86UF4 302 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ABHD4Q8TB40 342 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SNX33Q8WV41 574 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 HTRA1Q92743 480 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RNF32Q9H0A6 362 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SMURF1Q9HCE7 757 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ISYNA1Q9NPH2 558 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 TRIM36Q9NQ86 728 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RHBDL2Q9NX52 303 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 DAPK2Q9UIK4 370 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ST6GALNAC2Q9UJ37 374 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ATMQ13315 3056 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 ANKUB1A6NFN9 424 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 C9J4A7 227 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 FLRT2O43155 660 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 PLPP2O43688 288 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 GLCEO94923 617 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 IL1AP01583 271 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 HLA-DPB1P04440 258 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 GP1BAP07359 652 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 OR8G3PP0DMU2 310 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 TFPIP10646 304 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 CTLA4P16410 223 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 LCN1P31025 176 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 CCKBRP32239 447 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 SFTPDP35247 375 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 CENPAP49450 140 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 FMODQ06828 376 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 CD300CQ08708 224 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF79Q15937 498 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 BAK1Q16611 211 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 NTRK2Q16620 822 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 ISXQ2M1V0 245 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 ODF4Q2M2E3 257 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 RGS21Q2M5E4 152 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 DMKNQ6E0U4 476 aaPredicted RBP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 CEACAM19Q7Z692 300 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC22A16Q86VW1 577 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 BPHLQ86WA6 291 aaPredicted RBP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 LYSMD2Q8IV50 215 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 TIGD4Q8IY51 512 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 RDH10Q8IZV5 341 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 OR8K3Q8NH51 312 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 PPP1R14AQ96A00 147 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 JSRP1Q96MG2 331 aaPredicted RBP6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 PROK2Q9HC23 129 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 TIGARQ9NQ88 270 aa6.66□□□□□ -1.34
SRFBP1-201ENST00000339397 MALT1Q9UDY8 824 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms