RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 LINC00299Q6ZSB3 139 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 H2AFVQ71UI9 128 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TRIM42Q8IWZ5 723 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 LRTM2Q8N967 370 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC89Q8N998 374 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 LRRC57Q8N9N7 239 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 GLB1L3Q8NCI6 653 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CEP70Q8NHQ1 597 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PIFOQ8TCI5 191 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ACTRT1Q8TDG2 376 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TMEM234Q8WY98 164 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 EME1Q96AY2 570 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SDSLQ96GA7 329 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PBKQ96KB5 322 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RBM14Q96PK6 669 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RNF157Q96PX1 679 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SORT1Q99523 831 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MYOCQ99972 504 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 WRAP53Q9BUR4 548 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NUP62CLQ9H1M0 184 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 C12orf65Q9H3J6 166 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 BATF3Q9NR55 127 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MRGBPQ9NV56 204 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CWC15Q9P013 229 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 XPO7Q9UIA9 1087 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RAB21Q9UL25 225 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NDRG4Q9ULP0 352 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SMAD5-AS1Q9Y6J3 95 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 LPAP08519 4548 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 A0A0U1RQK1 487 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 C1orf232A0A0U1RR37 186 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SHISA3A0PJX4 238 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF705EA8MWA4 302 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 APOC4-APOC2K7ER74 178 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PRMT5O14744 637 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TPD52L2O43399 206 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HCRTO43612 131 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 FGF17O60258 216 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RASSF9O75901 435 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TGDSO95455 350 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 APOC2P02655 101 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MMEP08473 750 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ABHD2P08910 425 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NUDT17P0C025 328 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 C1GALT1C1LP0DN25 315 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ETS1P14921 441 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RAC2P15153 192 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HOXB6P17509 224 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 KRT15P19012 456 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 GRK2P25098 689 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 EVI2BP34910 448 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 KRT9P35527 623 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SERPINB5P36952 375 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SLC1A3P43003 542 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 XCR1P46094 333 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RAB7AP51149 207 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PRKAA2P54646 552 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CORO7P57737 925 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TAGLNQ01995 201 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RAB40BQ12829 278 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 STK3Q13188 491 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PRPSAP1Q14558 356 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 KIAA0040Q15053 153 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ZSCAN26Q16670 478 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 GTDC1Q4AE62 458 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CBWD6Q4V339 395 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CBWD3Q5JTY5 395 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CBWD5Q5RIA9 395 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC122Q5T0U0 273 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SAMD13Q5VXD3 122 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ALS2CLQ60I27 953 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ATG16L1Q676U5 607 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SULT1C3Q6IMI6 304 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NIPBLQ6KC79 2804 aaeCLIP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HCP5Q6MZN7 132 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF585AQ6P3V2 769 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ATG4DQ86TL0 474 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SLC30A8Q8IWU4 369 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ENTHD1Q8IYW4 607 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF619Q8N2I2 560 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 METTL4Q8N3J2 472 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PQLC3Q8N755 202 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 POM121L12Q8N7R1 296 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NECAB1Q8N987 351 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MINDY2Q8NBR6 621 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 FBXO36Q8NEA4 188 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 OR10G9Q8NGN4 311 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CD200R1Q8TD46 325 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ZFP90Q8TF47 636 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SLC5A11Q8WWX8 675 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 C10orf35Q96D05 121 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SGTBQ96EQ0 304 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SAAL1Q96ER3 474 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 AKR1E2Q96JD6 320 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MAELQ96JY0 434 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CNDP1Q96KN2 507 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TCEANC2Q96MN5 208 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 BIRC8Q96P09 236 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NAP1L3Q99457 506 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms