RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 C20orf24Q9BUV8 137 aa13.01□□□□□ -0.33
PABPC1-201ENST00000318607 NKX6-2Q9C056 277 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-201ENST00000318607 ISYNA1Q9NPH2 558 aa13.01□□□□□ -0.33
PABPC1-201ENST00000318607 ABRACLQ9P1F3 81 aa13.01□□□□□ -0.33
PABPC1-201ENST00000318607 OPN4Q9UHM6 478 aa13.01□□□□□ -0.33
PABPC1-201ENST00000318607 ARHGEF17Q96PE2 2063 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-201ENST00000318607 ASXL3Q9C0F0 2248 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 MDC1Q14676 2089 aaKnown RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 CDC14CA4D256 554 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 ITGA10O75578 1167 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 NGFRP08138 427 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 TLX1P31314 330 aaPredicted RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 SLC6A6P31641 620 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 PBX2P40425 430 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 P2RY2P41231 377 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 ACTR1BP42025 376 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF136P52737 540 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 CAPZA1P52907 286 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 ACTR1AP61163 376 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 SLC7A9P82251 487 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 SPOCK1Q08629 439 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 TGIF1Q15583 401 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 TMEM44Q2T9K0 475 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 DMKNQ6E0U4 476 aaPredicted RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 ERN2Q76MJ5 926 aaKnown RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 JAZF1Q86VZ6 243 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 PRR22Q8IZ63 422 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 OR1S2Q8NGQ3 325 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 OR1S1Q8NH92 325 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 VRK1Q99986 396 aaPredicted RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 REG4Q9BYZ8 158 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 BCL2L10Q9HD36 194 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 AKAP7Q9P0M2 348 aaPredicted RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 NPFFR2Q9Y5X5 522 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 STON1Q9Y6Q2 735 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF98A6NK75 572 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 HRKO00198 91 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 FAM199XQ6PEV8 388 aaPredicted RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 LNX2Q8N448 690 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 OR5AK2Q8NH90 309 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 HGDQ93099 445 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 CMBLQ96DG6 245 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 SPACA5Q96QH8 159 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 CCDC3Q9BQI4 270 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 SHARPINQ9H0F6 387 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 RNF208Q9H0X6 261 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 WDR13Q9H1Z4 485 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 DPEP2Q9H4A9 486 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 MRPS18AQ9NVS2 196 aaKnown RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 TRBV23-1A0A0A0MS06 115 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 PRR32B1ATL7 298 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 SYT5O00445 386 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 TXNL1O43396 289 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 SLC35G6P0C7Q6 338 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 GJD3Q8N144 294 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 OR2L3Q8NG85 312 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 TMED6Q8WW62 240 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 MRPS24Q96EL2 167 aaKnown RBP13□□□□□ -0.33
PABPC1-201ENST00000318607 SRMSQ9H3Y6 488 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 LAMP5Q9UJQ1 280 aa13□□□□□ -0.33
PABPC1-201ENST00000318607 KIF26BQ2KJY2 2108 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 GABARAPH6UMI1 98 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 PRAMEF2O60811 474 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 DLSTP36957 453 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 CAPZA2P47755 286 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 TAS2R43P59537 309 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 ADAM8P78325 824 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 CDNFQ49AH0 187 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 LINC00518Q8N0U6 118 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 NAXEQ8NCW5 288 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 OR1J2Q8NGS2 313 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF514Q96K75 400 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-201ENST00000318607 ARHGDIGQ99819 225 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 SPTBN5Q9NRC6 3674 aaKnown RBP12.99□□□□□ -0.33
PABPC1-201ENST00000318607 CCDC85CA6NKD9 419 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 ACOT7O00154 380 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 FGF17O60258 216 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 EML2O95834 649 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 ADH1AP07327 375 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 CST5P28325 142 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-201ENST00000318607 POU3F4P49335 361 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 FAM53BQ14153 422 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 RNLSQ5VYX0 342 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 C3orf33Q6P1S2 294 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 STAC2Q6ZMT1 411 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 COMMD2Q86X83 199 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 OR6V1Q8N148 313 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 CLRN3Q8NCR9 226 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 AHCYL2Q96HN2 611 aaKnown RBP12.99□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF350Q9GZX5 532 aa12.99□□□□□ -0.33
PABPC1-201ENST00000318607 OR14I1A6ND48 311 aa12.98□□□□□ -0.33
PABPC1-201ENST00000318607 TMEM235A6NFC5 223 aa12.98□□□□□ -0.33
PABPC1-201ENST00000318607 CLEC3AO75596 197 aa12.98□□□□□ -0.33
PABPC1-201ENST00000318607 AKR7A3O95154 331 aa12.98□□□□□ -0.33
PABPC1-201ENST00000318607 OR6A2O95222 327 aa12.98□□□□□ -0.33
PABPC1-201ENST00000318607 PAPLNO95428 1278 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms