RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NRIP3Q9NQ35 241 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 ENOPH1Q9UHY7 261 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 COL12A1Q99715 3063 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 OR14I1A6ND48 311 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 ATXN7O15265 892 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 ARHGEF9O43307 516 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 TLX2O43763 284 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 CD14P08571 375 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 CLUP10909 449 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 ACVR1BP36896 505 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 SIRPAP78324 504 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 LGALS3BPQ08380 585 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC17A1Q14916 467 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 MESTQ5EB52 335 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 OTPQ5XKR4 325 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 RPL13AP3Q6NVV1 102 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 DPY19L2P2Q6ZN68 376 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 PTCHD4Q6ZW05 846 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 MCEMP1Q8IX19 187 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 OR9K2Q8NGE7 335 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 OR9Q1Q8NGQ5 310 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 PLEKHA8Q96JA3 519 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 RDH12Q96NR8 316 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 TSSK2Q96PF2 358 aa13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC35F4A4IF30 521 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 SMNDC1O75940 238 aaKnown RBP eCLIP13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 BCL10O95999 233 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 EDNRAP25101 427 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 NTF4P34130 210 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 GGT2P36268 569 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 SELENOPP49908 381 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 RPS6KA3P51812 740 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 ACSF3Q4G176 576 aaPredicted RBP13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 LEG1Q6P5S2 330 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 B3GLCTQ6Y288 498 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 FAM122BQ7Z309 247 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 ANKK1Q8NFD2 765 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 OR51L1Q8NGJ5 315 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 FAM57AQ8TBR7 257 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 RNF128Q8TEB7 428 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 INTS12Q96CB8 462 aaKnown RBP13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 OXGR1Q96P68 337 aa13.71□□□□□ -0.22
PDLIM5-202ENST00000318007 A0A1W2PNV4 684 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 HTR3EA5X5Y0 456 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF716A6NP11 495 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 FAM171A2A8MVW0 826 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 PRRG2O14669 202 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 SURF4O15260 269 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 TRAF3IP2O43734 574 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 TSPAN19P0C672 248 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 SDHAP31040 664 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC16A1P53985 500 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 CDC42P60953 191 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 CD47Q08722 323 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 CRMP1Q14194 572 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 SLX4IPQ5VYV7 408 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 TTC23Q5W5X9 447 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 NIPAL3Q6P499 406 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 CREB3L2Q70SY1 520 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 PXKQ7Z7A4 578 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 ENTHD1Q8IYW4 607 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 LNX2Q8N448 690 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 CNEP1R1Q8N9A8 125 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 C9orf106Q8NAJ2 232 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 BBS1Q8NFJ9 593 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 HCAR1Q9BXC0 346 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 AMBNQ9NP70 447 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 DNAJC27Q9NZQ0 273 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 RNF6Q9Y252 685 aa13.7□□□□□ -0.22
PDLIM5-202ENST00000318007 TRGV8A0A0C4DH27 118 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 FIGNL2A6NMB9 653 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 XKRYO14609 159 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 CYTIPO60759 359 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 CDKN2AP42771 156 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 HSPA13P48723 471 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 NUDT6P53370 316 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 PER3P56645 1201 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 RPL27P61353 136 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 FMODQ06828 376 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 IGFBP7Q16270 282 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 SMN1Q16637 294 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 ZNF691Q5VV52 312 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 ABLIM2Q6H8Q1 611 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 RTL6Q6ICC9 239 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 PLBD1Q6P4A8 553 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 JAZF1Q86VZ6 243 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 DOLPP1Q86YN1 238 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 C8orf59Q8N0T1 100 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 HTRA1Q92743 480 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 SLC38A2Q96QD8 506 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 SYT4Q9H2B2 425 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 RPRD1BQ9NQG5 326 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 PAQR5Q9NXK6 330 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 CLCF1Q9UBD9 225 aa13.69□□□□□ -0.22
PDLIM5-202ENST00000318007 ING1Q9UK53 422 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms