RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PLEKHJ1Q9NW61 149 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 CD84Q9UIB8 345 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 SLC7A7Q9UM01 511 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 MTHFD2P13995 350 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 RPS2P15880 293 aaKnown RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GALNSP34059 522 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GDNFP39905 211 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 EMP3P54852 163 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 ARF5P84085 180 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 VWA2Q5GFL6 755 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 CYB5R2Q6BCY4 276 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM185AQ8NFB2 350 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 TXNRD2Q9NNW7 524 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 NSG2Q9Y328 171 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 STMND1H3BQB6 276 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 RPP14O95059 124 aaKnown RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 MAOBP27338 520 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF620Q6ZNG0 422 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GRINAQ7Z429 371 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 CADM3Q8N126 398 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GPR137CQ8N3F9 429 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 PBX4Q9BYU1 374 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GSKIPQ9P0R6 139 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 RHOP08100 348 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 TFPTP0C1Z6 253 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 RPA2P15927 270 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 FUT1P19526 365 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 DLX2Q07687 328 aaPredicted RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 PRAMEF19Q5SWL8 479 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF561Q8N587 486 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 OR9Q2Q8NGE9 314 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 HMGCLL1Q8TB92 370 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 HGDQ93099 445 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 KIRREL1Q96J84 757 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 OCSTAMPQ9BR26 566 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 HCAR1Q9BXC0 346 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 TPOP07202 933 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF865P0CJ78 1059 aaPredicted RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 P4HA3Q7Z4N8 544 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 FAM83FQ8NEG4 500 aaPredicted RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 RAB8BQ92930 207 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 ALG12Q9BV10 488 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 MFRPQ9BY79 579 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 UBQLN3Q9H347 655 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 KCTD3Q9Y597 815 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 TRAV18A0A075B6X5 111 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GSTZ1O43708 216 aaPredicted RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 WASP42768 502 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 FIGLAQ6QHK4 219 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 FAM111BQ6SJ93 734 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 PIANPQ8IYJ0 282 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 POGLUT1Q8NBL1 392 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 KCNE4Q8WWG9 221 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 PINX1Q96BK5 328 aaKnown RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 CXorf58Q96LI9 332 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 UHRF2Q96PU4 802 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 SLIRPQ9GZT3 109 aaKnown RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 CRLF2Q9HC73 371 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 NRLP54845 237 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 C19orf57Q0VDD7 668 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 EXT1Q16394 746 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 STEAP1BQ6NZ63 245 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 CSNK2A3Q8NEV1 391 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GJC3Q8NFK1 279 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 OR8K3Q8NH51 312 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 OR7D2Q96RA2 312 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 ACER3Q9NUN7 267 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 HHLA1C9JL84 531 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 MSTNO14793 375 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ARPC1BO15143 372 aaKnown RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 SLC31A1O15431 190 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 SFTPDP35247 375 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 AADACL4Q5VUY2 407 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 OR2A12Q8NGT7 310 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 RANGRFQ9HD47 186 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 KDM4EB2RXH2 506 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 GCSHP23434 173 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 PER3P56645 1201 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ALKBH1Q13686 389 aaKnown RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 SGCBQ16585 318 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 DEFB134Q4QY38 66 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 LIPIQ6XZB0 460 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 C1orf87Q8N0U7 546 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 OR14L1PQ8NHC6 308 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ZDHHC1Q8WTX9 485 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 MRGPRX3Q96LB0 322 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 GAL3ST1Q99999 423 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 SLC2A9Q9NRM0 540 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 CUTCQ9NTM9 273 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 C19orf53Q9UNZ5 99 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ZFAND5O76080 213 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 OR4Q2P0C623 313 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 CTF1Q16619 201 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 AKIRIN2Q53H80 203 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 RAB3CQ96E17 227 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF426Q9BUY5 554 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 MCTS1Q9ULC4 181 aaKnown RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 B3GALT5Q9Y2C3 310 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms