RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 MIB2Q96AX9 1013 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 SLC35A3Q9Y2D2 325 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 PPIL1Q9Y3C6 166 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 COLCA2A8K830 154 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 H3BSH0 61 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 H7BY64 318 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 H7C417 338 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 PPP1R3DO95685 299 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 ZNF44P15621 663 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 ZNF3P17036 446 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 SPI1P17947 270 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 ABCD3P28288 659 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 AKR1C3P42330 323 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 C11orf87Q6NUJ2 197 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 WDR88Q6ZMY6 472 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 MISPQ8IVT2 679 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 ARL11Q969Q4 196 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 C14orf79Q96F83 325 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 PRAP1Q96NZ9 151 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 MTFP1Q9UDX5 166 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 A0A1W2PPE3 182 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 RNF222A6NCQ9 220 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 UBE2CO00762 179 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 PRICKLE3O43900 615 aaPredicted RBP16.51■□□□□ 0.23
SPSB4-201ENST00000310546 TBX19O60806 448 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 OR4E1P0C645 316 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 CEBPBP17676 345 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 C22orf39Q6P5X5 142 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 OR10R2Q8NGX6 335 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 GLYATL1Q969I3 302 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 CPEB1Q9BZB8 566 aaKnown RBP16.51■□□□□ 0.23
SPSB4-201ENST00000310546 TSPAN10Q9H1Z9 355 aaPredicted RBP16.51■□□□□ 0.23
SPSB4-201ENST00000310546 UQCC1Q9NVA1 299 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 MAFFQ9ULX9 164 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
SPSB4-201ENST00000310546 VPS13AQ96RL7 3174 aa16.51■□□□□ 0.23
SPSB4-201ENST00000310546 WRBO00258 174 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 ZIC2O95409 532 aaPredicted RBP16.5■□□□□ 0.23
SPSB4-201ENST00000310546 GKN3PP0CG01 181 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 MNDAP41218 407 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 SSR2P43308 183 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 SOX2P48431 317 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 PDX1P52945 283 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 SLC7A9P82251 487 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 DUSP2Q05923 314 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 PRRT3Q5FWE3 981 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 RPL22L1Q6P5R6 122 aaKnown RBP16.5■□□□□ 0.23
SPSB4-201ENST00000310546 DPPA4Q7L190 304 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 SFTPA1Q8IWL2 248 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 SAMD14Q8IZD0 417 aaPredicted RBP16.5■□□□□ 0.23
SPSB4-201ENST00000310546 PPP1R1CQ8WVI7 109 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 MFRPQ9BY79 579 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 PLEKHA6Q9Y2H5 1048 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 GLSO94925 669 aaPredicted RBP16.5■□□□□ 0.23
SPSB4-201ENST00000310546 LIPCP11150 499 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 ETV3LQ6ZN32 361 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 TMPRSS12Q86WS5 348 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 TIFAQ96CG3 184 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 ZC3H10Q96K80 434 aaKnown RBP16.5■□□□□ 0.23
SPSB4-201ENST00000310546 PFDN5Q99471 154 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 MACROD1Q9BQ69 325 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 CLDND1Q9NY35 253 aa16.5■□□□□ 0.23
SPSB4-201ENST00000310546 YBX2Q9Y2T7 364 aaKnown RBP16.5■□□□□ 0.23
SPSB4-201ENST00000310546 CTNSO60931 367 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 RCBTB2O95199 551 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 F3P13726 295 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 MC3RP41968 323 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 ATP1B3P54709 279 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 C10orf91Q5T1B1 145 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 LIN54Q6MZP7 749 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 PSRC1Q6PGN9 363 aaPredicted RBP16.49■□□□□ 0.23
SPSB4-201ENST00000310546 ACOT7LQ6ZUV0 252 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 C17orf64Q86WR6 236 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 OR4A4PQ8NGN8 299 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 GPR174Q9BXC1 333 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 SEC11CQ9BY50 192 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 SLITRK2Q9H156 845 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 TCF7L1Q9HCS4 588 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 NDUFS4O43181 175 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 LY86O95711 162 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 HEXAP06865 529 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 CSF1P09603 554 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 PRF1P14222 555 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 SLC2A5P22732 501 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 PSMB5P28074 263 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 GRPRP30550 384 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 SDHAP31040 664 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 ACTA2P62736 377 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 ACTG2P63267 376 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 GPM6BQ13491 265 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 ZNF345Q14585 488 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 DCUN1D3Q8IWE4 304 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 TRAM1L1Q8N609 369 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 CACNA1CQ13936 2221 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 OR1F1O43749 312 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 PAPLNO95428 1278 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 POP4O95707 220 aaKnown RBP16.49■□□□□ 0.23
SPSB4-201ENST00000310546 AKAIN1P0CW23 69 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 CASRP41180 1078 aa16.49■□□□□ 0.23
SPSB4-201ENST00000310546 POLR2LP62875 67 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms