RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 PPP2CBP62714 309 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 PPP2CAP67775 309 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 RUNX3Q13761 415 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 GPR18Q14330 331 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 GK2Q14410 553 aaPredicted RBP13.55□□□□□ -0.24
RUNX3-201ENST00000308873 ARHGAP40Q5TG30 622 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 OVCH1Q7RTY7 1134 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 CD163Q86VB7 1156 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF227Q86WZ6 799 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 IQCF2Q8IXL9 164 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 CHST4Q8NCG5 386 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 FAM174AQ8TBP5 190 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 ZFYVE21Q9BQ24 234 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 HDAC8Q9BY41 377 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 ACTR10Q9NZ32 417 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 FBXO4Q9UKT5 387 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 CTSBP07858 339 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 VAMP1P23763 118 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 PWWP2BQ6NUJ5 590 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 ARMC6Q6NXE6 501 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 SYT4Q9H2B2 425 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 GRHPRQ9UBQ7 328 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 MRTO4Q9UKD2 239 aaKnown RBP13.55□□□□□ -0.24
RUNX3-201ENST00000308873 FOXJ3Q9UPW0 622 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 A0A0B4J2E0 115 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 A0A1B0GUH1 482 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 A0A1B0GX12 115 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 TACSTD2P09758 323 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 EFNB2P52799 333 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 RPS11P62280 158 aaKnown RBP eCLIP13.55□□□□□ -0.24
RUNX3-201ENST00000308873 ULK3Q6PHR2 472 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 NUDT18Q6ZVK8 323 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 KCTD9Q7L273 389 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 ADGRG3Q86Y34 549 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 MUC20Q8N307 709 aaPredicted RBP13.55□□□□□ -0.24
RUNX3-201ENST00000308873 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 COMMD9Q9P000 198 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 DTX4Q9Y2E6 619 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 SLC22A7Q9Y694 548 aa13.55□□□□□ -0.24
RUNX3-201ENST00000308873 TRAV8-7A0A075B6U6 113 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 AMY2AP04746 511 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 DIO1P49895 249 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 SKP1P63208 163 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 ITPRIPL2Q3MIP1 535 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 BEST3Q8N1M1 668 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 SLC22A18Q96BI1 424 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 TIMM29Q9BSF4 260 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 GPR160Q9UJ42 338 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 ERVK-19Q9WJR5 959 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 KIAA1671Q9BY89 1806 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 KCNAB3O43448 404 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 BRINP1O60477 761 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 NMBP08949 121 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 SPARCP09486 303 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 VSIG10L2P0DP72 767 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF425Q6IV72 752 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 TSSK4Q6SA08 328 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 BAIAP2L2Q6UXY1 529 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 ATXN7L1Q9ULK2 861 aaPredicted RBP13.54□□□□□ -0.24
RUNX3-201ENST00000308873 KLHDC2Q9Y2U9 406 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 PRR32B1ATL7 298 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 SDC3O75056 442 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 MAP3K8P41279 467 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 CDKN2AP42771 156 aaKnown RBP13.54□□□□□ -0.24
RUNX3-201ENST00000308873 H2BFSP57053 126 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 ALG10Q5BKT4 473 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 USP53Q70EK8 1073 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 POMGNT2Q8NAT1 580 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF764Q96H86 408 aaPredicted RBP13.54□□□□□ -0.24
RUNX3-201ENST00000308873 Q9N2J8 555 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 DUSP22Q9NRW4 184 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 C14orf105Q9NVL8 296 aa13.54□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF230Q9UIE0 474 aaPredicted RBP13.54□□□□□ -0.24
RUNX3-201ENST00000308873 C13orf42A0A1B0GVH6 325 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 EIF1AYO14602 144 aaKnown RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 PTP4A3O75365 173 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 SC5DO75845 299 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 APBB3O95704 486 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 RLN2P04090 185 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 MAOBP27338 520 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 Q499Y3 187 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 FAM122CQ6P4D5 195 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 ZNF546Q86UE3 836 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 SLC35F3Q8IY50 421 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 OR10K1Q8NGX5 313 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 OR2A5Q96R48 311 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 CMKLR1Q99788 373 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 WDR76Q9H967 626 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 TAS2R5Q9NYW4 299 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 TGM6O95932 706 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 HOXD4P09016 255 aaPredicted RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 GIPP09681 153 aaPredicted RBP13.53□□□□□ -0.24
RUNX3-201ENST00000308873 POU3F4P49335 361 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 RCBTB1Q8NDN9 531 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 FAM46BQ96A09 425 aa13.53□□□□□ -0.24
RUNX3-201ENST00000308873 PIPOXQ9P0Z9 390 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms