RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 SGCBQ16585 318 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 EEF1A1P5Q5VTE0 462 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 GUSBP11Q6P575 273 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 YIPF7Q8N8F6 280 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 HAVCR2Q8TDQ0 301 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 SLC25A36Q96CQ1 311 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 ZNF486Q96H40 463 aaPredicted RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 MNTQ99583 582 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 TAS2R10Q9NYW0 307 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 MRM2Q9UI43 246 aaKnown RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 ARID1BQ8NFD5 2236 aaPredicted RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 A0A0B4J203 849 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 ANKRD61A6NGH8 418 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 A8MV72 311 aaPredicted RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 C11orf98E9PRG8 122 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 RPP14O95059 124 aaKnown RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 ZFPL1O95159 310 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 WISP1O95388 367 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 ANKRD34CP0C6C1 535 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 CLDN20P56880 219 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 MRPL28Q13084 256 aaKnown RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 TATDN3Q17R31 274 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 FAM69AQ5T7M9 428 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 PRR23CQ6ZRP0 262 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 GRINAQ7Z429 371 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 ANKRD37Q7Z713 158 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 OR6N2Q8NGY6 317 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 GPR119Q8TDV5 335 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 RGP1Q92546 391 aaPredicted RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 UPRTQ96BW1 309 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 SEMA4CQ9C0C4 833 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 DDX28Q9NUL7 540 aaKnown RBP21.7■■□□□ 1.06
TRIM54-201ENST00000296098 LAMP5Q9UJQ1 280 aa21.7■■□□□ 1.06
TRIM54-201ENST00000296098 ACOD1A6NK06 481 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 XKRYO14609 159 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 ARHGEF9O43307 516 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 EEF1E1O43324 174 aaKnown RBP21.69■■□□□ 1.06
TRIM54-201ENST00000296098 LANCL1O43813 399 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 UPK3AO75631 287 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 HEXBP07686 556 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 TFPIP10646 304 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 ZFP69Q49AA0 526 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 KANSL1Q7Z3B3 1105 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 PM20D2Q8IYS1 436 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 OR4D9Q8NGE8 314 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 METTL21AQ8WXB1 218 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 HSD17B8Q92506 261 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 KLHL15Q96M94 604 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 OR6C1Q96RD1 312 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 CTRCQ99895 268 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 WDR76Q9H967 626 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 CLEC4AQ9UMR7 237 aa21.69■■□□□ 1.06
TRIM54-201ENST00000296098 A8MVM7 634 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 PDCD5O14737 125 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 PIN1P1O15428 100 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 NPIPB7O75200 414 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 AKR7A3O95154 331 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 ABHD16AO95870 558 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 SRMP19623 302 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 HLA-DMAP28067 261 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 EFR3AQ14156 821 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 NKAIN1Q4KMZ8 207 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 C1orf140Q5VVS0 124 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 LIPNQ5VXI9 398 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 TSSK4Q6SA08 328 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 MISPQ8IVT2 679 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 DERL3Q96Q80 235 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 ABHD1Q96SE0 405 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 NUFIP1Q9UHK0 495 aaKnown RBP21.68■■□□□ 1.06
TRIM54-201ENST00000296098 LAMA1P25391 3075 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 SOX1O00570 391 aaPredicted RBP21.68■■□□□ 1.06
TRIM54-201ENST00000296098 SQSTM1Q13501 440 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 ALKBH1Q13686 389 aaKnown RBP21.68■■□□□ 1.06
TRIM54-201ENST00000296098 HACD4Q5VWC8 232 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 ASB18Q6ZVZ8 466 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 ADGRG3Q86Y34 549 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 SLC38A9Q8NBW4 561 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 APCDD1LQ8NCL9 501 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 ZNF671Q8TAW3 534 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 DUSP19Q8WTR2 217 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 INTS14Q96SY0 518 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 SLC25A18Q9H1K4 315 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 SPATA2Q9UM82 520 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 N6AMT1Q9Y5N5 214 aa21.68■■□□□ 1.06
TRIM54-201ENST00000296098 TRIOBPQ9H2D6 2365 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 TRIM3O75382 744 aaPredicted RBP21.67■■□□□ 1.06
TRIM54-201ENST00000296098 UBL3O95164 117 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 TIAF1O95411 115 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 SLC26A5P58743 744 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 GPR176Q14439 515 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 COL28A1Q2UY09 1125 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 LGALS14Q8TCE9 139 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 MARVELD1Q9BSK0 173 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 IKZF2Q9UKS7 526 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 ALG5Q9Y673 324 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 TMEM14AQ9Y6G1 99 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 SDK1Q7Z5N4 2213 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 EXPH5Q8NEV8 1989 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 LY6G6EA0A0G2JKS1 128 aa21.67■■□□□ 1.06
TRIM54-201ENST00000296098 ADAM10O14672 748 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms